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11-4535-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1568194 [Map]; Strand: c
      • AT3G05430.1 - [+] show detail - Tudor/PWWP/MBT superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4535-1 - 5-prime edge 
    ACCAGAACGT AACCCATCTT CTTCACACGA CGAACAGAGG GAGACGCAAA 
    AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1568310 [Map]; Strand: c
      • AT3G05430.1 - [+] show detail - Tudor/PWWP/MBT superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4535-1 - 3-prime edge 
    GTTCTGGTTG CTTTCTTTGG GGATAATAGT TATGGATGGT TCGATCCTGC 
    TGAGCTTATC CCTTTTGAAC CTCATGTGAA GGAGAAATCA CAGCAAACTA 
    GTTCGGATCA CTTTGCAAAA GCTGTGGAAG AAGCTATGAA TGAAGTAGGT 
    AGAAGGTCAG CTCTTGGCTT GACTTGTAAA TGTCGGAATC AGTATAACTT 
    TAGGCCTATT AATGCTCAAG GTTACTTTGC TGTAGACGTG CCTGATTACG 
    AGGTCCAAGC TATTTACTCT TCTAAGCAGA TTCAGAAAGC TAGGGATAGT 
    TTTTCATCTG TGCAAACTCT AGCTTTTGTG AAGCGGTGTG CATTAGCACC 
    TCAAGAGTGT GATACAGACA GCTTAAAGTC TTTCCAGAAG AAAGTAGCGG 
    TTTGTGCATT CCGTAGAGCA GTGTTTGAGG AGTTTGATGA TACATATGAA 
    CAAGCT

AT3G05430.1

Model type
Protein coding
Short Description
Tudor/PWWP/MBT superfamily protein
Computational Description
Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G27650.1); Has 708 Blast hits to 664 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 463; Fungi - 18; Plants - 206; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link
InterPro Scan - TAIR