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11-4552-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 327361 [Map]; Strand: w
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: 1845; Region: intergenic
      • AT5G01849.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -4412; Region: intergenic
    Flanking Genome Sequence: 11-4552-1 - 3-prime edge 
    CATGGTGGTG GGGGTACCCG TACATCACAC GGACACTGGC CACCACCAGT 
    AAAGAAACAC ATTATTATAC ATTTATAATT TGTTTCTAAT AGGTATCTCA 
    GATCTTTGTA AATTGTTGTC TTTGTACCCG TACATCACAA GTCCATGTTT 
    TAAGCAAGAA ACTTAAATTA AAAATCTGGG AGTATAAACG TCTCATACTT 
    ATTATTGTGT ACTCTTACTA CCATGCGATG ATATCAAACA ATTTAATTTA 
    AAGTATTGTT GTACTTATAT TTTTATTTAT ATAAAAAAGT ATTGTTGTAA 
    TTTTTCTTAA CAATTTTACA AAAAATTCGT TGTAGTCCAT GGCCGGCGTG 
    CCCGACAAAG CT

AT5G01840.1

Model type
Protein coding
Short Description
ovate family protein 1
Curator Summary
Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.
Computational Description
ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01849.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR