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11-4582-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7994366 [Map]; Strand: w
      • AT1G22610.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-4582-1 - 5-prime edge 
    CTCTTAACAC TCCTCGAAAC AAAAAGAAGA TGTTCTTCTT CATCTTCTTT 
    CTTCTCCTCT CTTCTTAGTT CATCTTTCTT CTCTTTACTT CACAATCTCT 
    TACTTTTAAA ATTAATCTTA CTCGCCGGAA CTTTTCTCTC TCACAACCGC 
    TTCAAACAAA ATTTATAAGT TTATCCGAAT ATGAATAAAC TAGTTGTAGA 
    AATCGTTGAC GCTAGCGATT TGATGCCAAA AGACGGACAA GGCTCAGCGA 
    GTCCTTTCGT AGAAGTTGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7994250 [Map]; Strand: w
      • AT1G22610.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: -41; Region: promoter
    Flanking Genome Sequence: 11-4582-1 - 3-prime edge 
    GTTAAGAGGA GTAAAACTCG GGGAACACAG AGAGGTCAAG AAGAAGACGT 
    CATTTTAGTC AAATTTTATA GATATAATAG TTTTATAATA TGGTTGTAAG 
    AAATAGAGAG AAATGAAATT ATCAAGTTGA ATTGTTTTGT TATTATACTC 
    AATGAATATT TTTGTTGAAT ATTCTTGATT ATTGCTTTTT AACTTATGAA 
    TCATTTGGTT TACTTTTTCG AATATTGTAT TCGTCGGTGA TTTCACCAAA 
    TATTCGTACG TATAGTTGAT GGAGAATAAA TTAAACTTTG ATGATTTAGC 
    TTTTTTTTTC GAATGAGGAG AAAAATGTAA GGGAAAAAAG AGAGAATTGG 
    GTGAGTGAGG AGTAGGGTCA AAAGANACGT ACCATCGTTG TCTTTGGAGG 
    ACNAACGTGG NGGNGGCCAT TTGTCTGCTT TGTTTGTTTA TATGCTAACA 
    TAATTAGAAA GNGGACTAAT TTCGTCGTTT TAATTTGGTT TAATTATTAA 
    ACAACCACAA TGAATNCGAC AATGAAATAT ATATATAATT GTTTTATTGC 
    AATGTGAAAT CGATCGTTAC CATCATGTGA TCTAAAATAT ATAGGCAATC 
    ATGTCAAATA TCATGAAATT ACAAAGCT

AT1G22610.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).
Link
InterPro Scan - TAIR