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11-4594-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1064468 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: -684; Region: promoter
      • AT1G04120.2 - [+] show detail - multidrug resistance-associated protein 5
        Distance: 0; Region: exon12 (3UTR)
      • AT1G04120.1 - [+] show detail - multidrug resistance-associated protein 5
        Distance: 0; Region: exon12 (3UTR)
    Flanking Genome Sequence: 11-4594-1 - 5-prime edge 
    CTCAAGTGTG ATCTGTATTG GGCTTATTAT AAGTGTAATC AGTACTGGGC 
    TTATAAGTTG TACAGAGCCC AATATAACAA TATCTGTACG ACGTCGTTTT 
    GTTGTGACGT AGTACCCNGA TGACAAAACG AGGCGTGTTG AGCGTGCGTG 
    TATAAATGCA CGTAGTGAAC GAACACTAAC CACGCTGCTG CATTTAATTC 
    CTTTCTCAAC GGTCGTATTT TCCTATTCAA GGCTTTAACT AAGTTTAATA 
    GTATGTTTTT AAAAAAATAC ATATATTTGG CCAATGGTTG ATTATTAAGT 
    TATTGTTAAA TGAATTTTCT TTGGCTTGGT AAAACTTCAA TGGAAACCAA 
    ATAAATTTCA AAATCTTTTG TTGCTGAAAA AGGCTACACA AACTACTATA 
    CGCAATAAAA CCTAACCATA ACATCTCGTG AACAAGGAAA AAAAANGGAA 
    AAACAGAGAC NCAGAGACAA GGCNGACAAA AAAGCCTTAC AAGNGAAAAA 
    CCTTAAACAG CTTCAGTNAA TATANTTCAT GTNTTANAAA AAAATAAAAN 
    AAAAAAANNT NNTACCTTTG CNNCNTACAA AGGATACTNN NNAGGGNGAG 
    NNNTNANTNT TNNNNANCNN NNNNANNTNN TTNNTTNNAN TCCAAANCCN 
    NNNNNNNANT NANNNNNNNN GNNNNNNNCC NNCCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1064534 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: -750; Region: promoter
      • AT1G04120.2 - [+] show detail - multidrug resistance-associated protein 5
        Distance: 0; Region: exon12 (3UTR)
      • AT1G04120.1 - [+] show detail - multidrug resistance-associated protein 5
        Distance: 0; Region: exon12 (3UTR)
    Flanking Genome Sequence: 11-4594-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GACTTGAGGG ATGATGACGA ATGATTAGTA GTTTCTACTC TAATCTTTGT 
    TTGTTTTTGC AGTTTATTGA TAAACATGAA AACCAAAGAA ACTAACTGTT 
    CCATACAAAA GAAGTTTCTC CCAATATTCG ACAGAAGAGA TTTAAACCCA 
    AAGTTTTTTA AGCGCGGAGA TTTTGGGATC

AT1G04110.1

Model type
Protein coding
Short Description
Subtilase family protein
Curator Summary
Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.
Computational Description
STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04120.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 5
Curator Summary
encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.
Computational Description
multidrug resistance-associated protein 5 (MRP5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, sulfonylurea receptor activity; INVOLVED IN: response to salt stress, cellular potassium ion homeostasis; LOCATED IN: vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1); Has 705301 Blast hits to 367091 proteins in 4105 species: Archae - 12555; Bacteria - 572920; Metazoa - 12444; Fungi - 7893; Plants - 6883; Viruses - 23; Other Eukaryotes - 92583 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04120.2

Model type
Protein coding
Short Description
multidrug resistance-associated protein 5
Curator Summary
encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.
Computational Description
multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1).
Link
InterPro Scan - TAIR