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11-4756-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 299430 [Map]; Strand: c
      • AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon9 (3UTR)
      • AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: 11-4756-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    CACACCCCAC GCGTGTGGCT TACTCGCGCT ACATAATAAT AATACTCAAG 
    ATAACAAACA CAAACAAAAA GAGTAAAGAG GGGGTTTCCA ACCCCAGTCA 
    ATACCCGAAC CACCAACTAC TCCACCGTGA TCGGACCCGA ACCCTTTTAC 
    GTCGTGGTCC CATCACGGTG ACAAAGGAGT TGGATCTCGC CCACTCGCGC 
    GGTTCGTTCT TGACTCGACA CCCCCTCCCT CCCATAGTAC AAGACCAAAA 
    AAACAAGTTA TATAAAAATT CACAATTCAT TAAGAAAAAG AAACACACGC 
    ACGCGCCAGT CTTGATCAAG ATCAGCTTCC GCATTGTAAA GCGGCACGAA 
    TCTTCTGAAC GGTGCATGAT ATTAGGTTGT TGACAGTCTC CACCGACTCA 
    ACCGTGAGTT TTGCCGTTGG GAGATTGTTT ACAAGGATTT GAAACGCCAC 
    TGTCAAGAGG GATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 299422 [Map]; Strand: c
      • AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon9 (3UTR)
      • AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: 11-4756-1 - 5-prime edge 
    TGATAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCCNG GGTNAGACAA CGCGANCTGN GAGATGANGA 
    TGTTATGTTG GATGGGATCT GTNTCGGTNC AAGTTAAAAA ANAAAAAAAA 
    ACATNTGTTT TNNGGGNNNT NAANNNTTTT TTGNNGGNNT NTNTNNNNNT 
    TTAAGGCTNT NNCCTGNCNN CNNNNTTTTN ANAAAATGGG GGNNNNANNT 
    CCCCCCCTTT TNNGGNCCCC CNCTNTTTCC CNNNNNNAAN NGGGGGNNAA 
    NAACCCCNCN TTTGCNCGNN CNNNTTTNNC CNTTTNNNNA GNGGGGNNTT 
    TTNNTTTNGN CNAANAGAGN GNGTNNNNAG NGNNCNCANN GNNNAAAAAA 
    AAANNCNCGN CNANNNNNAT NTNNTATNNT TNTNNGGGGN GGGGNTNTTT 
    TTNNAANCNC NCGCCCNNTC NNNGGGTAAG GNAAANNGTN AGNNNNNANA 
    ANANNAATGG GGGGACANAA AANTATNTAA NNGGNTATNN GNTTTNNGCG 
    TTTTTTTTNN NAAAGANTGA NNGNGNCGNG NNCGGNCGNG ANNTTNNCNN 
    NCTANNAANG GNTGGNNCAA NNATNNTNNT CAATCCCCCN NNCTTTAAAN 
    ATANNGNCNA CNNTGCNNTC NNTAANNANC GNNGAGNGGN GNGANATANA 
    NNAAGATNNA NGNAACGCTT TNNCTTNNCA NACCNANNGN TTNANAAANA 
    NNCAATANCN AATNNACCAC CNCNNATANN NAGCNGANCN CNTNTGNGCG 
    ANNTCNTNAT NNNANAN

AT4G00730.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00730.2

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR