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Mutant Lines
11-4773-1

11-4773-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 16563108 [Map]; Strand: w
- AT4G34710.1 - [+] show detail - arginine decarboxylase 2
  Distance: -139; Region: promoter
- AT4G34710.2 - [+] show detail - arginine decarboxylase 2
  Distance: -177; Region: promoter

GTTATGACTG AGGCAAGTTT GATTTGGGCC ATGGGGCCCA TTTACGATTA 
CGTTTTATAC TTTTCTTTTT CTTTCAACAT TGTATTTTTT CCCTCTATTA 
AAAGAAATTT ACCCTACATT TCTTTAGGTG CTTTGCTCCA ACAAAAAAAA 
AAAAAAAAAA NTTTTNGGGG NAAAAAAATT TTTTTTAAAA AAAAANTTNA 
AAAAANCCNT TTTTTTTTTC CCGGNNNNNN NCGGGNGGGG GNTTTTTTTT 
TTTNGGAAAN TTTTTTNAAA NNAAAAANTT TTTNNNTTNN NNTTNCCCCC 
CCCGGNAANG GGGGNANNNG GGGNCCCCNG GGNANCCNGG GGGGGGGGNC 
CCCNNNAAAA AAATTTNGGG NTTTTTTNNN ANCCCNNNTT NNNNNAAAAN 
TTTTTTTTTT NANCCCCCCC NCNNAAAAAA AANTNNNNNT TTTAAAAAAN 
NGGGAAANGG GGNCNTTTTT TTAAANNGGN NCNNNGGGGG GGGNCCNTTT 
TTTTTTGNNN GTTNNNNNNN GGGGGGGGGA ANNNCCNGGG NNNNNTNNAN 
A

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 16562992 [Map]; Strand: w
  - AT4G34710.1 - [+] show detail - arginine decarboxylase 2
    Distance: -23; Region: promoter
  - AT4G34710.2 - [+] show detail - arginine decarboxylase 2
    Distance: -61; Region: promoter
Flanking Genome Sequence: 11-4773-1 - 3-prime edge
```
GTCATAACCT TCTCACGTTG GTTCCTGATT CCCTAGTCCC TATATAAGCA 
AGTGCCAATA GCCTTCATCA ATCTCACGCC TTCTCTTCTT CTTCTTCTTC 
ATTTCCGTCT TTTCCGCTAG GTTTCCGTCT CTGTTTTTTC TTGCATTTTC 
CCCAGAATT
```

AT4G34710.1

Model type: Protein coding
Short Description: arginine decarboxylase 2
Curator Summary: encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.
Computational Description: arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 7853 Blast hits to 7777 proteins in 2122 species: Archae - 112; Bacteria - 5255; Metazoa - 102; Fungi - 32; Plants - 645; Viruses - 2; Other Eukaryotes - 1705 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34710.2

Model type: Protein coding
Short Description: arginine decarboxylase 2
Curator Summary: encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.
Computational Description: arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR