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11-4814-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 218292 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4814-1 - 5-prime edge 
    TGTGTGTGAG TGTGAGCTCG AAGCCCTATC CGACGAAATG TATCCGACGA 
    GTTTCGATCC TAAATCTGTT CTTGAAGAAT CTGAATATCC CCAATTGTCG 
    TGAATCTCAG GAACATCTTC GTCTCTGTTC AGGTACCTGA GCACCATTCT 
    CATCAGCGGC CGAGATTCCG GTTTGTGGTG ACAACAGAGC AAACCGACGG 
    CGAGAGCTAG CCTTGCCTCT CCTTCGTCGT AACCAGATCC GAGTCTCGGG 
    TCGATCGCAC TGAGGATCTC ACCGCTCGCT TGTAGCTCCA TAACCCAGTC 
    GGCTATAAAG AAGGTCCCAG AGTCCGTCGG TTTCCTCCCG GAGACGATCT 
    CTAACAGCAA AACGCCAAAC GCGAAAACGT CGGAAGCTGA TGAGGAGTTT 
    CCGTTGCGGG CTAGCTCCGG CGCCATATAT CCAATCGTGC CGACGACTAC 
    GGTGGTGCAC GATTGAGATC CGCGTTCGTA AAGCCTCGCG AGTCCAAAGT 
    CTCCCAATCT AGGATTCATA TCGGAGTCAA TCAGAACATT GCTAGGTTTC 
    ACGTCTCTGT GAATCACGAT CTGTTCCCAT TCTTCGTGGA GATACAACAA 
    ACCAGACGCG ATTCCTTTAG CGATTTGAAA ACGCNCGTTC CACGACAAAA 
    CGGCTCCGCT TCTTCTCGGT TTACTGTAAA GCANCGAGTC CAAGCTACCA 
    NCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13508901 [Map]; Strand: w
      • AT2G31760.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4814-1 - 3-prime edge 
    CTTTATAGTN NNCTGTANGA GCANGTACTT GCACNNANGC ATGACNACAA 
    GCATACCCTA GCAATTTCCT TTCGAGTGTA TGATTCAAAG CAAATTCCAC 
    ATTGAATATC CACTTCTGTA CCATTAACAT CAACGACAGG CTCCTTTAAT 
    ATACCAACGG TTTTACGGAT TCTCTCTTCG TCCGTAAACC ATTCATCTTC 
    GAGTTTACTA ACACACCAAT GATAGTGAAG AAGCAGAACA ATCGCTTCCA 
    CTTGGCTTAG AAAGAGAATC GTGGAAACTC GTTCGATGTC GTCTCTTTGA 
    AGCT

AT2G31760.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
ARIADNE 10 (ARI10); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G31770.1); Has 3151 Blast hits to 3123 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 1297; Fungi - 638; Plants - 670; Viruses - 10; Other Eukaryotes - 536 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01560.1

Model type
Protein coding
Short Description
lectin receptor kinase a4.3
Curator Summary
Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.
Computational Description
lectin receptor kinase a4.3 (LECRKA4.3); FUNCTIONS IN: kinase activity; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 124782 Blast hits to 123109 proteins in 4852 species: Archae - 131; Bacteria - 14218; Metazoa - 45637; Fungi - 10709; Plants - 35284; Viruses - 441; Other Eukaryotes - 18362 (source: NCBI BLink).
Link
InterPro Scan - TAIR