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11-4823-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27438181 [Map]; Strand: w
      • AT1G72920.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4823-1 - 3-prime edge 
    ATGGAACCCT TGTTTTCGAA ATCCATAATC TTCACAAGCT CTTCGAGACA 
    CCAACGAGAC GCAGCGTAAT TCACGGAGAC CACAACGACG GCGAATCTCG 
    ACCCTTCGAT GGCACGTATT AGCTCCGGCG AAATCCTCCG GCCATTCTTC 
    AACTCCTTGT CGTCTTTAAA GGTTCGAATG TTTCTTCGAA TCAGTTCTCT 
    GTAGAGGAAA CTGATGAAGT TGCGGCGAGT GTCGAGTCCT CTGAAACTTA 
    GAAAGACATC GTACTTAGTC GCAGTAGGAG AAGACATTTT GATTTTTGAT 
    TCTCTCTATT GAGAACTTAA CTATGATGAG TAATAGAAAT AAAGAACTCA 
    AGGATATTTA TAGACCACTA GAGAGTAGTT GAACTAAATA AAGCATGTGC 
    ATTGGTTAGA GACTCCCATA GTCTTCCTGC TAAGTGTGTG TTTCCTGGCA 
    TTTTCTATTT TTTTCTGTCA GGTTCTGTTT TACTAAACTA CTCAGAAAGA 
    GGGGAAGAGA AAAGATGGGC CGCCAAAGTA AGAAAATGAT GAGCATGATA 
    ATAATAAAAT ACTACTAACG AACAAAAATT ATCATCTTAC TTTTGTGGTG 
    TGTATTGGCA TTTACTGGTT TTGATTATCT GATCAAACGA ATGGTTGAAA 
    CTGAAGGACG AAAAAAGATC ATGAGATTCA GTTCTTGTCG GCTGGTTT

AT1G72920.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: response to wounding, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1); Has 1749 Blast hits to 1659 proteins in 68 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 0; Plants - 1708; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR