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Mutant Lines
11-4849-1

11-4849-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18032997 [Map]; Strand: c
- AT4G38570.1 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
  Distance: 0; Region: intron2 (CDS)
- AT4G38570.2 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
  Distance: 0; Region: intron2 (CDS)

GTTGTCAGTC TACCTCTACA TTCCCAATAT CGTTGGTCGG TTTTTTGCTA 
CTTCCTTTCT TCTGTCTTTA AAAATTTCAT TTTTTTTTAA ACCATATGAN 
ATTAGTGTTG TTACATGCAA AATTGGCAGG GTACATGANA GTTCTCTTGA 
ACTGCATTGC CTTCTCTGTG TGCTTCTCCA ACAAGACACT CTTCTCCCTC 
TTGTACTTTT TCAGGNGACT TTATCCTTGN GGTACCAACA TCATGTTCTT 
CTCCTTTTTT GATCTTGNGT GTTNGGNGCT TCTTCTTTCA TATGTTAGTC 
ACTCTTTACC CAATCTTGTT TCCAGTTTTT GTTGTGATGC TGTGGATGGA 
TGGTGCGCTC GTAAATTTAA CCAAGGNGCT CTTTTCATTC TCCCCATCTC 
TTTTCTTAGC TTCAACTAAC TCATTACTTA TGCTTCCTCT ATGATCCTGA 
CATTGATTAA ATATGACATT TCATGTCATT TGTCTCATTG ATCAATATTT 
TTAGTCCCAT ACACAGTTTA TTCTTGTTCT ACATTATCAG AAACGATTGA 
ACGTAACACA CAACTCTTTT CCTTTCAGTC TCTACATTTG GAGCTGTTTT 
GGATATGGTT ACAGATAGGT GAATCTTCCG CTACATATTC CCNAGTTTCA 
ACTTGCTCAT TCTTTTAATC TCATTAAACA TTTTTGGCAT ATATTTNGGG 
GTC

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 18033113 [Map]; Strand: c
  - AT4G38570.1 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
    Distance: 0; Region: exon2 (5UTR)
  - AT4G38570.2 - [+] show detail - probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
    Distance: 0; Region: exon2 (5UTR)
Flanking Genome Sequence: 11-4849-1 - 3-prime edge
```
CTGACAACGT CGCCGGTCTC TGTTTAGCCA TAACAGAGAG AGAGAGACTT 
CAGTTTGGGC AATCTGTTCC CCAACGAAGA AAACAAGGAT CTCGCCAATG 
AAGGGATACC TACACGAGAT TAGAAAGAAA AAAGGAACAA ACTTTGTGGG 
AAAATGCGTA CGGACAGAGG AACCCCAAAT CCGGTAAATA CGTGAACACA 
CACACACACA CAAAGTNGGT CAATCGATTT TCANACGCAN CTGGAAATAT 
CANATCTCAA AGTANGTNTG GGGAAATTAA ATATTTCTCA CCTGCCTAAG 
AGAAATTGGG AACGANGGGA TC
```

AT4G38570.1

Model type: Protein coding
Short Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Computational Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1); Has 2530 Blast hits to 2530 proteins in 950 species: Archae - 14; Bacteria - 1497; Metazoa - 167; Fungi - 185; Plants - 77; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38570.2

Model type: Protein coding
Short Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
Computational Description: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (PIS2); FUNCTIONS IN: phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phosphatidylinositol biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: phosphatidylinositol synthase 1 (TAIR:AT1G68000.1).
Link: InterPro Scan - TAIR