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11-4890-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2961040 [Map]; Strand: w
      • AT5G09530.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4890-1 - 3-prime edge 
    CTCGCCGGTT ATTGGAGGAT CCTAAACCGG AGATACCAAN ATTGCCTGAG 
    CTACCTAAAT TCGAAGTTCC CAAGTTGCCG GAGTTCCCTA AACCAGAGTT 
    GCCCAAGTTA CCCGAATTTC CAAAGCCTGA GTTGCCAAAG ATCCCGGAGA 
    TTCCAAAGCC AGAGTTACCA AAGGTACCGG AGATTCCAAA GCCTGAGGAA 
    ACTAAACTGC CAGATATTCC CAAGCTTGAA TTGCCCAAGT TTCCGGAAAT 
    TCCAAAACCT GAGCTCCCAA AGATGCCAGA GATTCCAAAA CCTGAGTTAC 
    CAAAGGTACC GGAGATTCAG AAGCCCGAGT TACCAAAAAT GCCGGAGATT 
    CCAAAGCCTG AATT

AT5G09530.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09520.1); Has 56710 Blast hits to 18930 proteins in 1860 species: Archae - 251; Bacteria - 17598; Metazoa - 17723; Fungi - 4561; Plants - 6151; Viruses - 953; Other Eukaryotes - 9473 (source: NCBI BLink).
Link
InterPro Scan - TAIR