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Mutant Lines
11-5088-1

11-5088-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1362482 [Map]; Strand: w
- AT1G04830.2 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -463; Region: promoter
- AT1G04830.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -501; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TCGGAGTAAC ATCTCCTTGC TTAATCATAA TCTTATCTTA 
CGAAAATCTT AGCTTATGAA ACGAAACTTC TCATATTTTC TATAAAAAAG 
AATTGGAATT TTCCATCTCA AAAACACAAG TAACCCACTT GAGCCCCTTC 
TCTTTCACTT CTAGGCCTGT GGGGTAACCC GAATCACTTC GGCCTGATAT 
AGCTGTGGTG TGTGGCCTGG TCTCAGAAAT CATGAGCTTG TCCTAATCCC 
TACTCTTGTG TACAAGAACA TGACAAGATT TGTACCGGAA AGCGCCATGA 
ATAAACAAAA AATTCAAGCA GCTCAGGCTG GGATGTTACA GAACATCGCA 
TTCTTCCTTT TTGGTTTGAG TCATTGTTGT TGACTAACCT GAAGGGATCA 
ACTATATCAC CAATAATCAC CACATGAACA TCTTCCATCT TTGAAATGAT 
GAAACTGTCT TGCATCTCTC AGTANAATAT CTCTTTGGCT GATCTTACTA 
ACATATTTCA TTAAAGAATG ACAATCTCCG CAGATTCTAA GGTTCTTAAT 
GATCCTTATC GTGGTCCCAG GAGCAGTTCT TAGAAACCCA AGTGTAAGAG 
CCAGTTTCTC ACTATGGATT CCCGTAACAT TTTCCTTCTC TTCTTCTTCA 
ATGTCATGAA TTGACCAATC AGCTCCTGGA TTGNATCCTT TCTGAATGGC 
AAGCGATNTG ATCTCATCAN

3 prime edge [+] show sequence

Chromosome: 1; Position: 1362480 [Map]; Strand: w
- AT1G04830.2 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -461; Region: promoter
- AT1G04830.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -499; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
CTATTAGTAT CTGTAGGTGT CATGTGTATT ATTGAAGACA ACAACGAAAC 
ACATGGCAAT TGTTTGCGAA GCACAGGTAT CACATGAGAA CAAATACCAG 
TCGCCAAGGT AAATTGGGTC CATCACTGTT GCTTGATTAA TCAATCTTGT 
GTTTGTATAT CACTTTATAT ATATGGTAAT ACGATAAAAT AAATCATAGT 
TATTGTTGCT TTCTGTTATA CCATTTAACT CAAATTATTT TGTTGATATC 
CAAAAATTAC CTCAACTCTT TAGATATATG ATAATACTAA TGTACATAAT 
CCATATATTT ATTGTAGTTT CCAAATATAT CCCTAATCAT AAAAAAAATC 
TTACAAATGA CTATGGATTT AAGTATTTCC AAACAAAACA AACAGGGGAA 
AATTGAATAA AGAAAAAGAA AGGGATAAAT GTGTAAATAG TCGACAATAT 
TGAGGCTATA TTTAATATTA ATTTCTTCGA TTCTTCTCTC TCTTTCTCTC 
TCTGTGAGAA GAAGCAAAAT CACGAACTTC CATTAATCAC CGACTCGCAG 
AACCTTTCTC TCATTAAATC TTGTGGAAAC CTCGGAAATT GAATCTGCGT 
GAGTTTCAAT CGCTTGATCG ATCCATCAAA CCCTAAAGAT GGTGAGGAAA 
AAGGTACCGG AATGGCTTAA TAGCACCATG TGGTCTACTC CTCCTCCGCC 
ATCTTCTTAC NACGATGGN

AT1G04830.1

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1); Has 3724 Blast hits to 3613 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 1821; Fungi - 641; Plants - 593; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04830.2

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1).
Link: InterPro Scan - TAIR