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11-5095-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19667815 [Map]; Strand: w
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -723; Region: promoter
    Flanking Genome Sequence: 11-5095-1 - 5-prime edge 
    CATAAAGTCG ACTTCCCTAT ACGTTTTCCA CAGTGTAGGT AGTAAACTTT 
    TCTTTTCTCA ATATATAAAA CTTTTTTTTT TATGTNTNAA NAGCNCAANG 
    AGTTCNCCAA ATAAATAAAT AAAGCNATTT TGATNGGNCT CTNTGTCACT 
    GAGGGGTCAT NGATTNGTNC GNAATTTTNG NGCCTGCCTT TNGTANGGGC 
    NTTGACAATA NATNCTGAGN GAACNAACAN ACAAATTATN TNTANACTAT 
    NCATTNGTTA ATTATANATT AGGATTTATN CAACTCAAAN AGTAATTATN 
    TAATAAAANG ATCCANCCNC TGGGAGTAAC GNGAGGCCTT NTNGAGTCAT 
    NANGACTNAC CTATCGGGCC ACCGTCCAGN GCCTCGCTTA CNCCATGTCN 
    ACTACTNGAT TTATNAAACC AAATTATTCC CNATNGCTCA TAATAAAANG 
    TNGGAAACAA AACATTAATT NGNCNGNGTT GGCTAAATNG TAAAANAGNC 
    NAAACNCTAG GCGTCCTCGA GTTTTTTTNT TCCTTTTCAA ACCAGTTNGG 
    TAACGNCAAA TTTAGTTGAC ATATGAATGN AGTTTTATTA CTTAATTNGA 
    ATTTAAATGG CATAAGGGCC AATCATGAAA TNCGCCGATN CATTTTGGTT 
    TTNAATTAAA ATATACNANC GATTTTGCCT ATGGGGCATA TTATGCATCN 
    GCGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19667699 [Map]; Strand: w
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -607; Region: promoter
    Flanking Genome Sequence: 11-5095-1 - 3-prime edge 
    ACTTTATGGA TGATTAGAAA AAGGTGTAGA AAAATTGCAA CAGGTCTTGA 
    ATCTTTCTTT AATTGAGTAA AAAAAACGTA GGAAAATGTT TTGGAACCGA 
    GAAAATTACG AAAGAGAGAG AGGCAGTCAT ATTATAGCAG ATTAGGAGAC 
    AATAATAAAG ATATATAGAG AGAGGCAAGG CCAGTTATGG TAGATAATTA 
    GTTCCAAACC ATGGATGGAT GGATGATACG AACGAAAACG GCCTAGTAGA 
    GAAAAGAAAG AGATTTTTGT CTTTTCCGGC AAGCGAGAGG ACTCTTCTCC 
    TGAGGGGCAA TGTGGGAAGA AGAAAGCTAA ATGATATGGC CACAACAGAC 
    TCGATCGAAG GACTTGTTCT CCTCACTTTC CTCCAACTTA ATTTTATTTT 
    TTTTAAGTTA TGGTTTAGTC AATAATTACN ATGGAGTCGA GTCGAGTTGA 
    GTTTGTCCCT CCCCCCCCCT NCCTNTTTTT AAACATNATC CNTGCCTAAA 
    GCTTTTNACT NGTNTTATTA ATTTTGGGGC TAAACCAAAN CCAAAGAANC 
    ATTTNTTNTT ACAAATTTTA NTTTCCAACA AAGCNTTCAA GCCCTTAAAC 
    CCCCNAAAAC CTCCTCCNAT CCCATTCTTT NNTTAACTGA TGGCTGAAAC 
    NCCGGNTTTT CCTNNTTTTN CCCCTCCCNT NGTTNTTTTG TCCNNTTCCC 
    CCNCNAGGAC CCCNTGCTNC T

AT2G48080.1

Model type
Protein coding
Short Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Computational Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR