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11-5192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8628878 [Map]; Strand: c
      • AT2G19980.1 - [+] show detail - CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 ...
        Distance: -658; Region: promoter
    Flanking Genome Sequence: 11-5192-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT CATAAAACTA ACACTGTTAA TGTAAACCGT 
    TACCGATCGT ATCATAAAAC TAACACTGTT AAATGAAACT CACGAGAGTT 
    AATAGAGATT ATATATATAC GCGTACGTAA CTAAGAAGAC TAATCAAAAT 
    TCCGATTGGA GATTAACGAA CGTTTTTCAC TTTGACTTTC TTAATTAATT 
    AATTATTTAC CAGAATTTCG TTAAAGGATT TGTAAGGAAA CATCTAATTA 
    GTGTGTCTCA GAGAGCAAAA TTCTTCTTAA TACGAAAATA GTGTCTAAAA 
    ATACATTTCT GTTACTGAAC AATCTTTATG GGAATACATT AATGATGAAG 
    TAGAATATTT TTTTTAGTGA TAACTTAATG ATAAATATCT TTTGTTACTC 
    TAAAATTANA ATCTCATCCT AATTTCTGTT AATTTAAGCA ATTTCGAAGA 
    GCAATATATA GGTTTTACTA TTTGATAATT TAACAAAAAG AAAAACAACT 
    TCGTCTTCTT TTTTTGGTTT AATGGTGAAT ATTGAAAACT TAAAAATAGT 
    CACGAAGCTC TTGTTTTGTT TGAGGCTTAC AAAAGGAGAT GAAAACCCNT 
    CANAAAAGGA ATCTGATAAG TCCTCACGAA AACATAGTTA GTTCCAAACC 
    ANTTNTNCNN CNNAAACAAA AGAGANAAAA TNTCTTTTTC AGGTTATAGC 
    TTNNTNNNAC TANCATTATN GNCCATNGNN TTACTCAATN TAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8628835 [Map]; Strand: c
      • AT2G19980.1 - [+] show detail - CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 ...
        Distance: -615; Region: promoter
    Flanking Genome Sequence: 11-5192-1 - 3-prime edge 
    TTTAAAACGG NAGAGGTATT TTACCGACCG TTNCCNCNCG TTTNCCTTCC 
    TACATTAAAT NAATGTAAAC CATTTCTGAA GATCATTGTG GGATAATATT 
    TTGTAATGTA GAGTAAAAAA ATATGCTTAG TAGTCAAATG GTTTCTAGTA 
    ACTGAATTTA ACATTAGACC AAAAAAAAAN TGTTCTANTA ATNGACCNGG 
    ATCTGGATNG GTCTTTGNCA TGTNTGTTTA TATATTAAAT AAATAGNAAA 
    TNTTNGATAA AATAGTTTAT NTAAAAAAAA NAANCAATTT GTTANTCNCG 
    GACTCAAATT AANCCTTNTG CCTAAAANCT TCTTACGTAN TNGANCTTNT 
    ATCNANCTTT CCTTNGGATT TGNAGNGGAA NATNNTCANN AAAAAAAAAA 
    AAANTNCCCC GNTTTNTNNN NCNNTTNTTA NNCAANNGGA ANCTTTTNCC 
    CCCCCCCGGG NAAAAACCCC CCCCCCTTNG GNTNANAAAA AAAAANTGGN 
    TNNCCNNANC CNNNGANGNC CCCTCNCCNA NGGGGTNGTT GANANTTNNN 
    NNANCCCCCG NNAGNNAAAA NNTTNCNNGN CCCNGTGGCC CANTTNNTNA 
    CGCNNNGNCN CNNGNNNAGC CNTCTGGGNT AGAAAAANGN GTTTTNNAGN 
    GGNNNAAAAN AGNGGGGGNN AACNNNTNTT GTCCCCCCNC CCNGCAAAAA 
    ANNTTTTTCT GNNNAGTNGG GGGNCANNGA NNNCNGCNAA TCNNNCNTTN 
    NNGANAAATG GGGGTGTNNN TATTNAANNC CNNANANATT NNT

AT2G19980.1

Model type
Protein coding
Short Description
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Computational Description
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT2G19970.1); Has 1947 Blast hits to 1907 proteins in 260 species: Archae - 0; Bacteria - 42; Metazoa - 857; Fungi - 192; Plants - 831; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR