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11-5256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12091007 [Map]; Strand: c
      • AT2G28315.1 - [+] show detail - Nucleotide/sugar transporter family protein
        Distance: 306; Region: intergenic
      • AT2G28320.1 - [+] show detail - Pleckstrin homology (PH) and lipid-binding START domains-containing protein
        Distance: -3739; Region: intergenic
    Flanking Genome Sequence: 11-5256-1 - 3-prime edge 
    ATGATGGGCG ATTTGACATA TGCATATAAT TATTATCGGT TTTTAGGATA 
    ACAGGAACCA GAAATTTCTA ATAATTGAAA TGCTTTATGC TCTTATTTTT 
    CCTTTCCATA TAAAAAATTT AAATGCAATT TATAACATAT ATACATATAG 
    ATATGTATAT TGTTAAATAT TACATGTGCG TTACGTCTAA CGTTTACGAG 
    AATT

AT2G28315.1

Model type
Protein coding
Short Description
Nucleotide/sugar transporter family protein
Computational Description
Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G28320.1

Model type
Protein coding
Short Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein
Computational Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) and lipid-binding START domains-containing protein (TAIR:AT3G54800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR