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Mutant Lines
11-5307-1

11-5307-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 138938 [Map]; Strand: c
- AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
  Distance: 0; Region: exon3 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAT TAAATTAGCC GGAGGTTGAT TATACCAGGT 
CCACTTAACC ACAGCCCACC CAATCCCTGA GAGATCTGTT TCGGAAACTA 
TAAGACTTAA AAACAAAAAC AAAAAGGGCA AATAGAAGCA AAACCCTAAT 
TTTAGAAAAT GAAGGATGAG AAGATATAAA CCGGTGGGAA CGTGATGAAG 
AGCGATTCCA GAGGAATGGA CTTGTCTGAG GAAGTCATGA GGGACGTCTG 
TTAGTATCCC AACGGCAGTG ATGGTGAGAG GACCAGAGTA GCCTAATTTC 
TCCAAAGCCC GTTTTATACA CGGACCGACC CTGCGAACAT CAACGTCAGC 
CGGAACCGGA CACCTGTTGA TGTCCCACCA GACGCGTGTT ACAGCCTTAG 
ACTTTGGCAC GACCTCACCC ACAGGCCACA GCCTTCGCCT TCCTCATCAT 
TCAAGACTTG GAAAATCTAG AAGATCGGAA AGCCAGAGAG AAGAAAAGAG 
ATGAGAACAT TCGATCGAAC CTTGTAGGAC AAATAATTAC CTGTTCAGAT 
GCGTTTTCTA CCCCATAGAA CTACCTTGTT ACCGCTACTT GTGGTGTGGT 
TTATTTATGG GCCGATTCGC GTTGCCCATT AACTGTNTCT TANCGCACGG 
GCCCNTTANA TTAAAAAGTT TGGTAAGGAA CTTTACTTTT GGCCTGTTTA 
TTAAACGACC GCGTTTTCAT TTGGGAAGCA AATTTNTTAT NA

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 138943 [Map]; Strand: c
  - AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 11-5307-1 - 3-prime edge
```
AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
CTGACATATC GTACGAGCAT ATCTACTTGA CCACTCTTGA CATGCTAGGT 
AGGATCGGAT ACAACACTGT TCGGTCTATT CTTCCAGATG ATCCTCAACA 
AGCCGCATCC TCCGCCTCCC CTTCTACAGG GTCTTTCCTC TGGGAAAGCT
```

AT1G01355.1

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR