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11-5399-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 306760 [Map]; Strand: c
      • AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: -2252; Region: intergenic
      • AT4G00740.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 671; Region: intergenic
    Flanking Genome Sequence: 11-5399-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCCTCAGG GAATGGGAAT GAATATTCCT CTTTACTTTT 
    CAACCTTTTT TTATTCACCA AACTAATTTC TTCATGACTC TGTCATACCA 
    ATAAGAGAAG CCATACGACA TTTTTTTTAT TTTGTGGCAG ACTCTTATGT 
    GTAAATTATT TTGTGACCAA CTCTTGCTGG TCGGTTATTC TGTGGAACCG 
    ACATTCCCAT GTGCTCCAAA CCGAACCAAA CCAATATGTT CCACTACTTC 
    CTTTCTTCTT CTTATGAAAT TGTTTTCCAT GATTTTGTTA TTATTCAGTT 
    CTTTTTAAGT GCGATGATCC ATAAATTCGG TTCAATTAAT TCTCACTTTA 
    TAAACACTCT AAATATCATC AACACTATAT AACCTCAGTT TTTGTATGTC 
    GTTTTAATTC TGTCATCAGC TTTGATATGT TTAACCAACA TGATTTTGTA 
    TATAACAATA GTTTAGCGAT TTGGTTGTTC TCCTTAAATA GAGATCCACC 
    AAGTCATATG TGATGTGGAC ACCGTTTTGA CCGGAAAAGT CGACGAATTA 
    TCATGTTTTT CAAACAAACT TGACGTAAAA GGTCAATTCT TTGGGNGCAA 
    CGACGAACTC ATGATCACTT NTCGACCGAA TCTACAACAA AAACCCATAT 
    GTTTCTTCTA CCCAAAAAAA GGAAAAAAGA NATNTTNGAG GCCNNGTNGA 
    CCTTAAA

AT4G00730.2

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00740.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR