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11-5469-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 358029 [Map]; Strand: w
      • AT2G01820.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5469-1 - 5-prime edge 
    ACAGCAATGA CCAGCAAGCT CCCAGACTTT TTCAATACTG GCTACAGTAT 
    CGTCATCGAG GCTGATGTTT GAGTCGATTG CGTTTTTGAA GGCATTTTCA 
    TCTTTGCTGG CTGCTACCCG ACGGAACCAT GTGACTAGAT GGACGCTGTC 
    TTCGGGTTGC GTCTCGTCTA GGGCTTTACG ACCAGTGATT AGCTCCATAA 
    GTATGACCCC AAGGCTGAAA ATGTCTACCT TGGTCGTCAC TCTTCCCGTC 
    ACTGCCAAAA TCAGAGTATA GAGCAATTGC CAAACGATCA AAAGGATGAA 
    ACTTTAACAT TTGGGTAAAT GCAATAAGAT CAAAGCATGA AAATTTAACA 
    TTTGGGTTAT AAGTGCAAAA CGACCAAAGT ACGAAACTTT GACATTGGGC 
    AAGTGCAAAT CAATTGAAAG GCAGAAACTT TAAAATTTGG GTAAGTACAA 
    ACCTGCGTAT TCTGGGGCAA GGTATCCGAA AGTCCCAGCA ACTCGAGTCT 
    CAATGGAGTA TTTGCCATCA GGGGCTAAAC GTACTAATCC AAAGTCAGAG 
    ACTTTAGCGC GCATATCATC ACCAAGAAGG ATGTTTGATG GCTTTANATC 
    CCTATGGATA AAGCTCTGAT GCGCAAGTGT GTGCAGATAC TCGACACCTC 
    GAGCTACATN CAATGCAATC GCCAGCCGTC TAGTCCAGTC TAACG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 357965 [Map]; Strand: w
      • AT2G01820.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5469-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGATTGCTGT GCCCGTGAGC CTTACCAGAG ACCAGACATG GCTCACATCG 
    TTAACGTCCT TTCTTCACTC ACCGTTCAAT GGAAACCAAC TGAGACCGAC 
    CCCGATGACG TCTATGGGAT AGATTACGAT ATGCCGCTTC CACAGGTGCT 
    TAAGAAATGG CAAGCT

AT2G01820.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink).
Link
InterPro Scan - TAIR