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11-5494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103608 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-5494-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTAGAACTAG AAGATGCACA AGCCATTGCT 
    ACTTCAGTGA TCTTCCATGC CGAACCAGCA TCAAACCTCT CCCCTAGCTT 
    TGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103589 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-5494-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    GAATAGACCG AGGATGAGTC ATGTAGTTGC TGAGCTATGA GTCATGTAGT 
    TGCTGAGCTA AAGGAGAGTG TAAGCAGAGC AAGAGCTCAA CAAGTGATAT 
    GAAATTGGGA CAGTAGTTAG TAGTAACCAC AACATGTAAA ATTCAATTGG 
    TATGATAGCT AACAATCTCC CACATTCTGT TGTGTGTTTC TTTGTTTTGT 
    AATAACTCTG GTTACGAGTA GAGAGACATT CATATAAGAA GCACATTTAC 
    AAAGTCTTAA AAGTTCATTA TAACCATAGA CCAAAAGGCT AGTTAGACAA 
    CTTAGCTAAT TCATTACAAC CATCGACCAA AAGGCTTGTT AGACAAAGCT 
    AATTCTCACA CGAGAATCCA AAGTCCTAAA AGTTCATTAG AGTAGATAGA 
    AAGATGAAGC CTAAGATAGA TAACAAAATA AGGCATTACA TCTTCATTAA 
    ACCCGAGATT AAACCGATAA ACATATACAA TCCAATAGCT TCCTCTTCTT 
    CTTCTTAGTT GGTTTGAGTA AGCACTGAAG TCACCTCCTT CAAAACATCC 
    ATGTTCGCCA ACAACAACTC ACATTTCTTA GCATCCACAA GCT

AT4G00236.1

Model type
Pseudogene
Computational Description
pseudogene, similar to leaf senescence-associated receptor-like protein kinase, blastp match of 56% identity and 4.7e-52 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris}
Link
InterPro Scan - TAIR