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11-5537-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14011522 [Map]; Strand: w
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5537-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTCATCATAG TGCTCCGCCT CTTCCATCGT TACATTTACC 
    TTCAGAATCT CAGTTTCATG ATTCTGTTGG TTATCAATTA GGGGACCACT 
    CTTCTTCTTT TTCTGGGTAA TTTCCTTTTA CTTTTCTTGC GATTTTGTCT 
    ATCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14011464 [Map]; Strand: w
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5537-1 - 3-prime edge 
    GCTGCATCAA ATCCATAGTC GATGTTTCAT TTTGTGAGAA TCCTTCCAAA 
    TTCGAAACCC CAATCATCGG CGTATAACCC TCTTGAAACC GCTGCAAATA 
    CGACTGATCA ATCTCCGTAC GATCATATGA AGTACGCNTG CTGATCTCGA 
    TCCTCATAGT ATTGGGCCCC GGCTCTCTCC ACGTCCCAAT TGAAGCGCTC 
    GAGATAAGAG AGGACTTCTT GTGAAGGCAA ATCAGAAGCC ACTGCTAGGA 
    ATAGATTGAT TCGTTCTTGC TTCAATTCAT GCGATAGTTC CTGCGGCGGA 
    TTCAAAACCC GTCCTGAATG GCTTCTTTTT CTTGGCGGCA ACGGATTCGA 
    AGTCAGACTT GGATAATTGA TCGATCTTGG ATC

AT2G33010.1

Model type
Protein coding
Short Description
Ubiquitin-associated (UBA) protein
Computational Description
Ubiquitin-associated (UBA) protein; CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein-related (TAIR:AT2G33000.1); Has 31 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR