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11-5560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 176594 [Map]; Strand: c
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5560-1 - 5-prime edge 
    ATAGCCGNCG ATCTGGACGG GACTCTGCTT CTCTCAAGAA GCTCCTTCCC 
    TTACTTCATG CTCGTCGCTG TTGAAGCTGG AAGCCTTTTA CAGTGGACTA 
    ATCCTCCTTC TCTCGTTACC ATTCGTCATT ATCTCTTACC TATTCGTATC 
    CGAATCTCTT GGTATCCAGA TCCTCATCTT CATCTCATTC GCTGGTCTCA 
    AAATCCGCGA TATCGAACTT GTCTCTCGCG CAGTTCTTCC ACGGTACGAG 
    ATCTAACATA GAGTGTTTTC TTGTTAGTAG ATCACTTTAG TTTTTTTCTG 
    ATGAACTTTG TTTAGGTTTT ACGCGGCGGA TGTGAGGAAA GACAGTTTTG 
    AGTTGTTTGA TAAGTGTAAG AGAAAAGTGG TAGTGACGGC GAATCCGATT 
    GTGATGGTGG AGGCGTTTGT GAAGGATTAT CTTGGAGGTG ATAAAGTTTT 
    GGGAACAGAG ATTGAAGTTA ACCCTAAAAC CAATAGAGCC ACTGGATTTG 
    TGAAANAAGC CTGGTGTTCT AGTTGGTGAT CTTAAGAGGT TAGCCATTTT 
    TAAAAAGAGT TTGGTAACGA ATCACCTGAN NTCNGCNCTC GGGTGATCGA 
    ACCTNTGATC AATGATTTTN ATGGCTCTCT GCAAGGTANT GTTCNAATCN 
    TTATNNTCCA ACNTGGGNNN ATNATTNGNN TAAAGNAAAG TNNAATTAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 176710 [Map]; Strand: c
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5560-1 - 3-prime edge 
    GCGGCTATCG AATCGTACTC TCCGTCTCTG CATTCCGTTA TTGGAGGGAA 
    GTTTTGACTC TTCTTCTCCG GAGACATTTT CACTCGCCGT GTGTGTGTGT 
    CTCTCTCTCA CTCTCGTTAA TGGCAGTTCT AAAGAACAGA GAGCAAAAAT 
    AAGAAGACAA GAGAGGGAAC GTTATGTTTT AAATGCACCT ATATTGAAGA 
    CCGTAATATT AATTCAGTGG GTTATATCTA TAATCTATAT CTATGTGAAT 
    GAATATGATA TATATATATA TATATGTATA TGTCATTNNC TANGANATAN 
    NCACTAAGAG CGTANAGTGT GGGGCCACAT GTNAAATTAC CANCCNGGGC 
    CGTNCACCAC GCGNGCCCNT ATA

AT4G00400.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 8
Curator Summary
Involved in cutin assembly. Is functionally redundant with GPAT4.
Computational Description
glycerol-3-phosphate acyltransferase 8 (GPAT8); FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 4 (TAIR:AT1G01610.1); Has 380 Blast hits to 369 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR