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11-5599-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16878292 [Map]; Strand: c
      • AT4G35550.1 - [+] show detail - WUSCHEL related homeobox 13
        Distance: -986; Region: promoter
    Flanking Genome Sequence: 11-5599-1 - 5-prime edge
    CCCCCGACTA CGATACGGCA TGAGTCATGA CCACATATTA TATTTTTCTT 
    TATCTTCATG TTTTTGTCGA CCATGGTCAC ATTTCATTGT TTGGCCTGGT
    TATTCGACAG AGATCAATTT TATTGGCAAT TAATGAGTCA GATTAGATCA
    TATTAAAATC TAAGTGCGCC CGTGGAACAT GGGCGGCGGA CACCGACCAC
    CTACAAATTC TACTGTTTAA ACGACACGTG GAAACTATTT ATTTTCTTTT
    TGGGTCGCCG CTCCTTAACT TATAAGTCCT GACTGGCCCA ACAATTTTTT
    TTTTNTTTTN GGTTTTTNTT AAAGGTTTNT TATTGAATTA AATNATAGGG
    ATNGCAAAAA ACGGNNAANC TAATACTNTT NTATANAATA ATNGAAAAAA
    ATNTAACCTA AAANGNGTCA AAAAAGTTAA ATCGCA

AT4G35550.1

Model type
Protein coding
Short Description
WUSCHEL related homeobox 13
Curator Summary
Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.
Computational Description
WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR