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11-5604-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3577109 [Map]; Strand: c
      • AT1G10750.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-5604-1 - 5-prime edge 
    ACTATAAGCA AAATTCTAAA GAGAAAGATT TTTTGTCCGG AGTGTTTATA 
    AATTCGAAAT TCGAATTTTT GGTATGAAAA TGTAAGGTTT TAAAATATAT 
    GGAATTTTTA TTTATTTACT ATATTTGCCT CTTTAGAGGA GAAGATAAAA 
    GTGGTCAACG AAATTGGCAA GTGTTTTCAC TTCTTCTATT GGTTTTGAAA 
    TTTCATCTTT TGAGAATTGT ATAACAAAGA AAGATAGACA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3577225 [Map]; Strand: c
      • AT1G10750.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-5604-1 - 3-prime edge 
    CTTATAGTAT AGGTGGACCA AAGATCTATC TCTTTTTCTT TTGGGTCTAG 
    ATTTTAATTT TCTTGGTAAA AATATATTTT TAGGTTTTCA AATTGGACCC 
    ATATGACTAA TGTTCACATT AAGAAAAAAA AAGAGGAGAA GATGAAAATC 
    TTACTTCATG CCCATTACTG CTAGTGTCTC TTCTGTAATG TCTGAGTTTC 
    TTGCCAAAGC TAGAAACAGA GTTTGCTCTG ANAATGTCTT CTTCTTTTGT 
    TCTTCTGATA GGGACTGTTC CCTCAGGACA TGTCTCCCCC TCCATTCCCC 
    ATAACTGGAA GCTCTTCGGT CTCAATCCTC TCCTGTTATG CCCTCTTGGC 
    CTCTCTGGAG GATC

AT1G10750.1

Model type
Protein coding
Short Description
Protein of Unknown Function (DUF239)
Computational Description
Protein of Unknown Function (DUF239); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 789 Blast hits to 744 proteins in 31 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 764; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR