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11-5650-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1057851 [Map]; Strand: w
      • AT1G04090.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5650-1 - 5-prime edge 
    CTTCCATTGC TTAGGTCACT ACTGTCAGTC TGATTCTCAT CCTTTGAGAG 
    GTTATGTACT TGCGGCAAGA GATTTAGTGG ATTCATTAGA ACAGGTAGAG 
    AAACCTGCAT TAGTGGAACC TGTTGATTTT ACTCTTGTCT GGAGCTCAAA 
    TGATTCAGCA GAAAATGAAT GTAGTAGTAA GAGCGAATGC GGTTACTTCT 
    GGTTACCGCA GCCTCCTGAA GGGTATAGAT CGATCGGTTT TGTGGTTACA 
    AAGACTTCCG TGAAACCTGA GTTGAATGAA GTTAGATGTG TTGGAGCTGA 
    TCTTACTGAT ATATGTGAAC CCCACAATGC CATTGTCACT GCTGTTTCAN 
    AATCTTTAGG TGTTCCTTTG TTTATATGGA GAACTCGGCC TTCAGACCGA 
    GGAATGTGGG GCAAAGGTGT CTCTGCAGGT ACTTTCTTCT GCAGAACTCG 
    GCTTGTTGCT GCTAGAGAAG ATCTTGGTAT CGGTATTGCT TGTCTAAAGA 
    TTTGAGTTTA CATGCGATGC CAAATGTTGA TCANATTCAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1057735 [Map]; Strand: w
      • AT1G04090.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5650-1 - 3-prime edge 
    AATGGAAGTC TTTAGGTAAC AATCCCTTTG GTTTGTAAAA TGAAATGTTC 
    TTCTTCTTCT CTGTGGATCT GTATCTCCAT ATAAATTCAA AATCCGTGAT 
    TTTGATGACT TGTAATTTGC CGAGATTGAT TGTTCCAGAG CCAAAGCCTT 
    GACCTGATCA GTTTTCAAAG GATGGAGAGA CAAAATCTAA GAGACCCAGC 
    TGAAAAATTT CTTCAAAACG CAATCTTTAA AGAATCCTCT TTGAAAACGC 
    AAAAGATTTG ATTGACCATT GTTCGAATTA GATTAGTGGA TATAGAGATC 
    TGATTGAAAA ACCCAATTGA ATTTCACGAA ATTGAGGAAA ATCGAGAAAT 
    AAAAATCTCT CTTTTGTCAA GGCTTAAGAA ACCTAAAATT GAAATAGAAT 
    TTTTGAATT

AT1G04090.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF946)
Computational Description
Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G43950.1); Has 349 Blast hits to 319 proteins in 89 species: Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 104; Plants - 206; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR