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Mutant Lines
11-5878-1

11-5878-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 352862 [Map]; Strand: c
  - AT1G02020.1 - [+] show detail - nitroreductase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT1G02020.2 - [+] show detail - nitroreductase family protein
    Distance: 0; Region: exon1 (3UTR)
Flanking Genome Sequence: 11-5878-1 - 5-prime edge
```
GTCTCTACCA TTTCACTGTG GGAGGTCCAG TTGTAGACAA GCGGATCATG 
ACTCTTCCTG CTTATCCTGG TCCCACCACC ACCGTTGCCT AAATCATACA 
TACCTCGTTA ATCTCTGTTG AATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 352978 [Map]; Strand: c
- AT1G02020.1 - [+] show detail - nitroreductase family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G02020.2 - [+] show detail - nitroreductase family protein
  Distance: 0; Region: exon1 (3UTR)

GTAGAGACTC TGAAAGCTGG AGTCTTTTAT CCCCAGAATC TCGTGCACTG 
GATCATCGAA ATAGCACCCA ATCCCGGTTG CTGAGATCCC CATTGCGTGT 
GCTTCCAGGT ACAAAACTTG CCCAACAACA CCCGTCTCCC AGAACAGTCG 
AGGGTACATC CATGAGCCCT TCTCCCGCAG AGCTGGTTCA AACCGAGCTA 
CCATGCCTAA GCTGAAGCAT CCATCCCCTG CAATGTCCTG CATCCATCAA 
CCACAATGAT TCAGTAACCA AGTGATATAT ATTGTTAGTT ACAACTCTAT 
CCGAATCTGT ACCTGATGAC ATGATAGCCC TTTTGCCAGC CTCTGGCAAT 
CACCCTCGGC GAGCTTGTAC AGAGGAAGAT TGTCCGGGCA TCCATCTGGT 
TTCGTCCACT CAAATTCAGG CCTCGTAGCT GTCTTGAGAT CACTGAGATG 
ATCCTCGTTT CTGACTAGGA GATACAGTCC CTTAGGCAAA CCCGAAACTC 
TGTGAACAAA CAAGGCAAGA TGAACCTCAG CAGTATCCCA AGGAAGAGCT 
CGAAACGGCA GCGCAAGTTG CTCTTTTTGG GACTCGCCTG TGGAAGGAAG 
ACAGTGCATC AGCATCTGGT AAAACGAAGA CATGTCTATA CAAGTAACAG 
CGTCCATATC AACAGCACTT CTTCTCGTCC TTACAACTTG CCTCACCGTT 
AACTTATTAT ATGAACTGTG GN

AT1G02020.1

Model type: Protein coding
Short Description: nitroreductase family protein
Computational Description: nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02020.2

Model type: Protein coding
Short Description: nitroreductase family protein
Computational Description: nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR