1. Home
  2. Mutant Lines
  3. 11-5903-1

11-5903-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1596460 [Map]; Strand: c
      • AT1G05430.1 - [+] show detail - unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; B...
        Distance: -642; Region: promoter
      • AT1G05440.1 - [+] show detail - C-8 sterol isomerases
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-5903-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATNCN 
    NNCANAACNA CGTAGAATGT GAATCGGGAG CGTTATTGGA TGTTTTCATC 
    CTCACGACGA TTGTATAGAG AAGCAGAGTC AAAGGCTAGC GCAATGACAC 
    CAACTTAGAA ACTTATGAGA AAAAAAAAAT NTTCCCCTNT GNGGTNCCTT 
    CGTNTTAAAA NCNTTGACNT CTTGTCTNGT TTNAGGTNTA GTTATNAACA 
    AGTCCTNGTT ATNGTNNCTG NCTAGTNGTA GTAGTNCTCA ANGACTCAAN 
    GTAGTAAAAN CNCNCNCCCT NGGTTCTTCN ATTCGTNGNC TAGTTGTNCA 
    AGGGTNGGCN CTCTCGGATG TNCTAGTNGN AAGTNCCTGT TTCATNGNCA 
    TTNGCTNGGT TCACTGNNAA AANCCCAAAC NCTTTCNTTT NGGTAAACCA 
    ANGGCCTTTN GTANCCCAAA AAAAATNGGN GTANCTCAGT NCGGTTNGAT 
    TNAATAAAAT TNCNAGTNGG TTTTNATTTN GGCTNGATTG GGTTNCNTTA 
    ACNCCGGTTN TNATCAGGTA NNCGGAACNC CAAGNGTTTN ATGATNTCNA 
    TNGTTAGNGA CANCAAACTG GAACTTTCNT CCATCACCGA CCTTTGGNTG 
    TACTNAAAAA CCCATGTNTT NGGATCTACC TGCAAAACCN ATGGGCTCCT 
    TTTGGGTTTN CCCCCAGGAA GNGTNGGNNT CGNGTTTNGA NTANCCGATT 
    TTCCCCTNTG N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1595923 [Map]; Strand: w
      • AT1G05430.1 - [+] show detail - unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; B...
        Distance: -105; Region: promoter
    Flanking Genome Sequence: 11-5903-1 - 3-prime edge 
    GTTATGATTA GTATCGTCGT ATCGATTTCA ATTTTAGTTC GGTTTATATT 
    TTTCCACATT GGTTTTTCGC CCTCTCCGGT TATAATGTCG AATTAAGTCA 
    GATTCGAACC GGTTCTTCCC CATGATCGAT TCGATTCGAT GGAGTGAGGA 
    GAGAGAAGGA CTATAAGTTT CCATGAGAAA GAAGAAGTAA TCACACACTT 
    GTTCTTCGAT TCGTTTCTGG GAACTGAGAA TATTTAAGAA CACGATGGCT 
    ATGGCCGCTT TAAATCAGCT TTTTGTTGTC CTAGCCTCAA AACCCGAGCA 
    GGTAGATACT CTTTTATCTT TTCAATTAAA CCCTAGACAA TTCCAGAAAA 
    ATCAACTCTT TTTCTACAAT CAAGTTTTAC CCAATCTATG TATGATACAG 
    GTTTCAAACT TCAGCAAGAT TGTTTCTTTG TTCAATTAGT TTTCCTCTGA 
    ATTGATATTG TTCGAATAAG TTGAGAATGT GTGTAATTGT TGTATGAATT 
    AAGGTGTGCA AATTTGGGCA AAATGTTAAA TTTGTTTGCT CTGTTATAGG 
    AGAAGATCAC GCCTGAAGAG TCTAGAGCTA TTGTCTCTTG CCATTTCAAA 
    GCT

AT1G05430.1

Model type
Protein coding
Computational Description
unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05440.1

Model type
Protein coding
Short Description
C-8 sterol isomerases
Computational Description
C-8 sterol isomerases; FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: ergosterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ERG2/sigma1 receptor-like (InterPro:IPR006716); Has 118 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 4; Plants - 21; Viruses - 1; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR