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11-5932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 525516 [Map]; Strand: c
      • AT1G02520.1 - [+] show detail - P-glycoprotein 11
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 11-5932-1 - 5-prime edge 
    GCTGCAAATG CGGTTACACA TGGAGATGTT TGCCCAAGCG ACCTAAACAA 
    GAAGAAAGTA GACATACCTG TTAGGATTAA TCTCACATCA AATATATAAA 
    GTTGATTGTC TAGGCTTTTA CTTACATTGA ACCCGCAACT ACAATGATGA 
    TCACGTTGAT CACAGCGCCA CCGGTATAAC CTTTTTCGAG TATCATCTTC 
    CCACCAAACC AAATAGCCAA AGCATAGCTG CTGAAAAATA CAAAGAACAT 
    TACTCCAAGT CCTAAACCGG TGGAGAAACC TTGTTGAATG CTTGATTTAT 
    ACGCCGATGT TATGAACTTC TTGTAGCTGT TAATGGCTTG CTTCTCTCCA 
    GTAAAAGAAG CAACCTTCAA ACCAAAACAA AACAAAAAGT CAAGAAGCAA 
    CTATCAGTTC AAGATTGTTT TGAAACTTAT AAATATGTTT GAGCTTTACC 
    GTTCGGATGG ACCCGATTGT CTGTTCAACA ACAGTTGCTG CTTTAGCATA 
    AGCGGCTTGT CCCCGAGAAG AAGCTCGAGT GACGATAAGC GCCATGGCTG 
    CACCAGCCAT AGCAAGAAGA GGGATCGAAA GTTAACATAA CCAATGTTAG 
    TAACCATCCT TTAATGAAAG CTAAACAAAA CCGCCGACNA AAGTANATAC 
    CANCTGAATA ACTTNCCANC CNGCAGATNA NNAAAGGTNA CAAATTTCAA 
    AATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 525632 [Map]; Strand: c
      • AT1G02520.1 - [+] show detail - P-glycoprotein 11
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-5932-1 - 3-prime edge 
    TTTGCAGCTG GTCAAGCTGC AGCATATAAG ATGTTTGAGA CGATCAAAAG 
    AAAGCCTTTG ATTGATGCTT ATGACGTAAA TGGAAAGGTT CTTGGAGATA 
    TCCGAGGAGA CATTGAACTG AAAGATGTGC ATTTCAGTTA CCCCGCGAGG 
    CCAGACGAGG AGATATTCGA CGGATTCTCT CTGTTTATTC CGAGTGGTGC 
    AACCGCAGCA TTAGTAGGAG AAAGTGGAAG TGGAAAATCT ACCGTGATCA 
    GTTTGATTGA GAGGTTTTAT GATCCAAAAT CTGGCGCAGT ACTCATTGAT 
    GGAGTGAATC TCAAGGAGTT TCAGTTGAAA TGGATTAGAA GCAAAATAGG 
    ATTGGTCAGC CAAGAACCTG TTCTGTTTTC GTCGAGCATC ATGGAGAATA 
    TCGCCTACGG AAAAGAAAAT GCAACAGTTG AAGAGATTAA AGCTGCAACA 
    GAGCTAGCTA ATGCGGCGAA GTTCATTGAT AAGTTACCTC AGGGGTTAGA 
    TACAATGGTA GGCGAGCACG GTACTCANCT CTCGGGAGGT CAGAAACAGA 
    GGATAGCTAT TGCGAGAGCT ATTCTTAAAG ATCCGCGGAT TTTGCTTCTG 
    GATGAAGCAA CAAGCGCGCT CGATGCGGAG TCCGAAAGAG TGGTTCANGA 
    NGCTTTAGAT ANAGNGATGG TTAACCGGAC TCCGTTTTNN NCCCTCATCC 
    ATTNANGTNC TGNCCGAAAT GCNGATNTGA T

AT1G02520.1

Model type
Protein coding
Short Description
P-glycoprotein 11
Computational Description
P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink).
Link
InterPro Scan - TAIR