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11-5974-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 310868 [Map]; Strand: c
      • AT1G01900.1 - [+] show detail - subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5974-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC AATCGCACGA ACCTCTCCAT CTAGACGGTA 
    CAGGAGTCAT GTGCAGTGTC TCGGAAGCTC ACGTGCTCCG GGGAGATCCC 
    AGTGTCCACA AGGCCGATGA TGACGTCCGA AGATAGGCTC GTCTCGTTCC 
    AAAGACCGAT CCCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 310866 [Map]; Strand: c
      • AT1G01900.1 - [+] show detail - subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5974-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGT 
    GCGATGAAGG CACAAACTTC TCATCTTCGG AGTGTAACAA GAAGATCATT 
    GGAGCTAGCG CATTTTACAA AGGCTACGAA TCAATCGTTG GAAAAATCAA 
    TGAAACCACT GATTTCAGGT TAGACGGTTG AAATATAAAT GAGCCCTCTG 
    TTTTTTAACT TCTTTTGATC TCACATTGTT TAGTCTCCAA ATGTTAATGG 
    GAATAACGTG AAGAATAACT TCCAACTTTT ACCAAAAAAA AACTTCTACC 
    ATATATATTA TGCAAATATA ACTCGTATAA ACACATAAGA TATAATTAAA 
    AACGTTGGGT AGCTCCATAA CGTTGATCCG AACATCAAAT TACCTTCCTC 
    AAAAATAATT GATCAAAATG AAAATGCTTT TGATGACTTT TAACTAAATA 
    TTTTGTTTGT TAATTTAANA TGTTCTCATT AAAAGTTATT ACTAATGGAN 
    AGCCCTTACT AATGGTTCCA TAGGTCGACT CGAGACGCAC AAGGACATGG 
    GACGCATACA GCCTCGACTG CTGCCGGAGA CATTGTCCCC AAAGCGAATT 
    ATTTCGGGCA AGCTAAAGGT TTAGCTTCAG GGATGAGGTT TACTTCNAGG 
    ATCGCTGCTT ACAAAGCTAC CANCCCGGGC CGTNNACCAC NCGGNCCCNT 
    NNA

AT1G01900.1

Model type
Protein coding
Short Description
subtilase family protein
Curator Summary
Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.
Computational Description
SBTI1.1; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: extracellular matrix, apoplast, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 6944 Blast hits to 6289 proteins in 1039 species: Archae - 198; Bacteria - 3931; Metazoa - 46; Fungi - 433; Plants - 1873; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink).
Link
InterPro Scan - TAIR