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11-6043-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1043816 [Map]; Strand: w
      • AT1G04040.1 - [+] show detail - HAD superfamily, subfamily IIIB acid phosphatase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6043-1 - 5-prime edge 
    GTTCCAGTCA CCAGCNCGGN CCGTTGACNA CGCGNGCGAT GTNNTTGTCA 
    GGGAAAGAAA CATGGTTCGG TCCATGTTTG AAAGAAGAGT TTTGGATCTT 
    GAGATTTTGA TCACAAGTGT GTATGTGTTT GTGTGTAAAG AGGCTTTTAT 
    AAGTAGAAGA GTCAAACTGG CAGCCCTAAC AATAAAGAAA AATAATTAAT 
    ACACAAATCT GAATCAAAGT TTTTGGTGTT TCATTATTTT TTTCATAAAT 
    AAAATAATAA TTTGGTTGTA ATTATACATT GTAGTATTTT TAAAAATATA 
    TATAGTTGTT TACTATNGNT TGGGGCANGA TACTGAACTA ACTTTACGGG 
    ANTGATGGGA GGGGATAATA TGAAAGGNTA ANTTAANATG CNGGTGAAAN 
    TAAAAGATTN GGATAAATNA NANANAATNA ANTGNNNNTT GNNAAAAANT 
    ATGATNGTTG AACTTATNAA AAAAAATAAA AAAAGNNTNA NGGNNTGANN 
    AANNGNTTNN NTNNATNANN GGNGANATAN TNGNNANNNN GNNTANTNAN 
    NTAATGTTGN ANAANNGNNN ANNNNNNANN NNNNNNANNA AANNNAANAA 
    TNNNTTANNT TTNNNNTTTN NNNNNNNANN NNNAAANNAN TNNNNGGATN 
    NNANNNGGNN NNNNATNNAN NAGNGGGGTG ATN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1043700 [Map]; Strand: w
      • AT1G04040.1 - [+] show detail - HAD superfamily, subfamily IIIB acid phosphatase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6043-1 - 3-prime edge 
    ACTGGAACAT CTTGAACCAA CTCAGAGGAC TCGGCTCATC GTCAAGCCAA 
    AATGGTATCG TTTCTAAAGG TATCAAGACG GACCTGAAAG GATACTGTGA 
    AAGCTGGAGG ATCAACGTGG AAGTTCACAA CATCAGAAAG TTCGATGTGG 
    TGCCTCAAGA GTGTGTATCG CACATTAAGG ATTACATGAC GTCATCGCAG 
    TACAAGGATG ACGTGGCGAG AACCGTTGAT GAGGTCATTC TTCATTTCGG 
    GAGCATGTGC TGTAGCAAGT CTAAGTGTGA CGGCATGGAC GCTTGGATCT 
    TTGATATCGA TGACACGCTT CTCTCTACCA TCCCTTACCA CAAGAAAAAT 
    GGCTTCTTCG GGTAATTTAT GAAATTCTCT ATCTTACCCG GTTTAAGATA 
    AACCAACTTG AATTGATGGG TGTTGTGTAT ACGTAACTGT ACATATTGTT 
    ACTTTTTAGC TTTTTACTTA AGTGAATGCA CTTTGGATCT GACTGAACCG 
    GACCGGATCT CTGATTAGAG ATGTGAATTT TAGATTTCGG TTCAATTTGG 
    ATTAATCTTA TTTTTCTCAT GCTAATGGAT TAAAAACAGA GGAGAGAAAT 
    TGAACTCAAC GAAATTCGAG GATTGGATAC AGAAGAAGAA AGCACCAGCA 
    GTGCCACACA TGAAGAAATT GTACCACGAC ATCAGAGAAA GAGGCATTAA 
    GATCTTCT

AT1G04040.1

Model type
Protein coding
Short Description
HAD superfamily, subfamily IIIB acid phosphatase
Computational Description
HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
Link
InterPro Scan - TAIR