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Mutant Lines
11-6058-1

11-6058-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Not mapped

CNGATCNATT TGAGTACCCT CTACAGGGTA GACCTCAACA GAAAACTGAA 
GAGTAACGGC AGCAAGTGAT TGAGTTCAGT AGTTCCTCAT ATAAAATTAT 
TGACTCTAGA GATATAGTAA TATGGAGAAG ACAAAATTGT TTCAAGCACC 
GACAGAACCA TAAGCGCCCC TTGTTTCAAA GAGAGGAGGA CNGGGTTATT 
CACATTTCAT TTGATGGTCA GAGGCGAATT GAAAGCTAAG CAGTGGTAAT 
TCTAAAGATT CCCCCGGGGA AAAATAGAGA TGTCTCCTAC GTTACCCATA 
ATATGTGGAA GTATCGACGT AATTTCATAG AGTCATTCGG TCTGAATGCT 
ACATGAAGAA CATAAGCCAG ATGACGGAAC GGGAAGACCT AGGATGTAGA 
AGATCATAAC ATAAGTTATT CGGCAGATTT TGATTCCTAT ATATCCACTC 
GTGTGGTACT TCTACCATAT ATAGAAGAAT TAN

3 prime edge [+] show sequence

Chromosome: 2; Position: 19685870 [Map]; Strand: c
- AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)
- AT2G48140.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: -539; Region: promoter
- AT2G48140.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: -539; Region: promoter

GCTGTGAGGG AGTGGTTGAG TTTCCGGTGA TGTAGCTGAG GCACGGAGAG 
AGAGTGGTCA GTGTGCTCAC GCATGAACTG CTCGGCTGTG CTTTTGTTAC 
GCTCCATAGA GCCGCCACAA GGGCTACAAA TGTGATTGCG TAGCCTTCTT 
CTATACCCCA TAATTTGAGT TATTATTGTT CAACTTTGGT GTTTTTGCTT 
TGGTTTAATT ATAGGAGGAA CTGACCAGAA AATGTCAAAG AGGCAGGTCT 
GGTTGGATGA CCTACTTTAC ATGGTTTATA TGGCTTTAAT TTATCAAACA 
TATCTATGTT CTAGATGCAT CCCAATATAT ACAACGCCAC GTAGACATGA 
ACCAGTATAC TTTTTCAGAA CTAATTAAAG ATTGTAATTA CTTAAGTTAC 
AAAATTACTA GGAGTATACC AAACTCAGCT ACTTTCTCTT TTTATTTGGT 
TTCTCTTTGT TAATTAATGA AATAAAAAGA AAAATTGTGT GTTGATAAGA 
GATTGAGAGA AAGGATATTA GTTGGAAGTT GTTGAACTCC AATGCACCCA 
TTTTATCATA TATAAAACTG AATAATTGTA TATCTATAAA GCATCGTAAC 
CGGAAGATTA AGCAGGCCAA TTAAAATGGA AGGCTTAACA TTGATAGTAG 
TGATGATGTC AAGCT

AT2G48130.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48140.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: embryo sac development arrest 4 (EDA4); CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 541 Blast hits to 526 proteins in 56 species: Archae - 0; Bacteria - 35; Metazoa - 27; Fungi - 2; Plants - 459; Viruses - 2; Other Eukaryotes - 16 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48140.2

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2).
Link: InterPro Scan - TAIR