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Mutant Lines
11-6090-1

11-6090-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 535643 [Map]; Strand: w
  - AT1G02540.1 - [+] show detail - unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae ...
    Distance: 0; Region: exon1 (CDS)
  - AT1G02550.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
    Distance: -840; Region: promoter
Flanking Genome Sequence: 11-6090-1 - 5-prime edge
```
ACGAGGTTGT TGTTGTTCTC TGTCGGGAAC TTAAATTGGT CAAGGACGTT 
CTTCTTCATA CGGATATTAC ACAAGGCAAC TTCTTGGAAT T
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 535527 [Map]; Strand: w
  - AT1G02540.1 - [+] show detail - unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae ...
    Distance: 0; Region: exon1 (CDS)
  - AT1G02550.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
    Distance: -956; Region: promoter
Flanking Genome Sequence: 11-6090-1 - 3-prime edge
```
AACCTCGTTG AGCAACCACC ACTACACAAC AATATGGTTT CAGGATC
```

AT1G02550.1

Model type: Protein coding
Short Description: Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description: Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47340.1); Has 183 Blast hits to 176 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR