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11-6169-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1301677 [Map]; Strand: c
      • AT1G04660.1 - [+] show detail - glycine-rich protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04670.1 - [+] show detail - unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; ...
        Distance: -184; Region: promoter
    Flanking Genome Sequence: 11-6169-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTATC TAAAGTACAT TGTATATCAT TAGTTATGAA 
    TTATGATGAT ATAGCTCGAC ATATAAATTA ATAATAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1301673 [Map]; Strand: c
      • AT1G04660.1 - [+] show detail - glycine-rich protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04670.1 - [+] show detail - unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; ...
        Distance: -188; Region: promoter
    Flanking Genome Sequence: 11-6169-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGACTTTAGA CAATATATTA TTGAGTGATT AAGACAAAAA AAAANCNAAA 
    ATCGAGTNTN TNGGCAANCA ATCAGGGTTN GAAAAATTNG GGTTTNGTTA 
    AANACAANCC NCAAANAACC CTNCAANNGC TCNTANCCGG ACAAATTNAA 
    TNCTCTCNTT TNTAAATAAT AANANAAAAT AAAGCTNCCA NCCCGGNCCG 
    TCANCCNCCC NNGGCCCTNN ANNNAAAA

AT1G04660.1

Model type
Protein coding
Short Description
glycine-rich protein
Computational Description
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 360 Blast hits to 349 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04670.1

Model type
Protein coding
Computational Description
unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR