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11-6204-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 138449 [Map]; Strand: w
      • AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: -64; Region: promoter
    Flanking Genome Sequence: 11-6204-1 - 5-prime edge 
    GTAACAAGGT AGTTCTATGG GGTAGAAAAC GCATCTGAAC AGGTAATTAT 
    TTGTCCTACA AGGTTCGATC GAATGTTCTC ATCTCTTTTC TTCTCTCTGG 
    CTTTCCGATC TTCTAGATTT TCCAAGTCTT GAATGATGAG GAAGGCGAAG 
    GCTGTGGCCT GTGGGTGAGG TCGTGCCAAA GTCTAAGGCT GTAACACGCG 
    TCTGGTGGGA CATCAACAGG TGTCCGGTTC CGGCTGACGT TGATGTTCGC 
    AGGGTCGGTC CGTGTATAAA ACGGGCTTTG GAGAAATTAG GCTACTCTGG 
    TCCTCTCACC ATCACTGCCG TTGGGATACT AACAGACGTC CCTCATGACT 
    TCCTCAGACA AGTCCATTCC TCTGGAATCG CTCTTCATCA CGTTCCCACC 
    GGTTTATATC TTCTCATCCT TCATTTTCTA AAATTAGGGT TTTGCTTCTA 
    TTTGCCCTTT TTGTTTTTGT TTTTAAGTCT TATANTTTCC NAAACAGATC 
    TCTCANGGAT TGGGTGGGCT GTGGTTAANT GGACCTGGTN TAATCAACCT 
    NCGGCTAATT NAATGCTCAT ATNNNACNAN CATATNTACT NNACCACNNT 
    NNACATNCTN NGNNNGANNN GATNCNNCNC TGNNNNGNNN ATTNTTNCNN 
    ANNANNCNNN NNANNNNNNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 138333 [Map]; Strand: w
      • AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: -180; Region: promoter
    Flanking Genome Sequence: 11-6204-1 - 3-prime edge 
    CTTGTTACCG CTACTTGTGG TGTGGTTTAT TTATGGGCCG ATTCGCGTTG 
    CCCATTAACT GTATCTTAGC GCACGGGCCC ATTAGATTAA AAAGTTTGGT 
    AAGGAACTTT ACTTTTGGCC TGTTTATTAA ACGACCGCGT TTTCAATTTG 
    GGAAGCAAAT TTCTATATCA AAATATGTGA ATCAGGATAT CGAGTTTGAC 
    GACTATTATT CTGACGATGA TTTACTAGGA AGTTGACTCC AAAACTCTGA 
    TTCAATTTTC AGTTTGTTTA AATTTAAAAG TTAATCAGTT TGAAACAACT 
    ATCGTCGTCA TCCGAATGAA TATATATAGG CCAGTGAGTA CAACAAAACA 
    AAAAGCT

AT1G01355.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR