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11-6237-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1061748 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6237-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC GCAAGACTAC GGAGATGATC ACAAGGCGTG 
    TCACTAACGT TGGGAGTCCT AACTCGATAT ACTCAGTGAA TGTCAAGGCT 
    CCAGANGGGA TCAAAGTTAT TGTCAATCCT AAGANACTTG TGTTCAAACA 
    CGTGGATCAN ACNCTGANCT NTANAGTATG GGTTTGGTTT GGACCANAAA 
    AACCCGAGGA GGGGANGGGG GCTAACCTTT GCNCCAANGG GCAGTTGACT 
    TGGGGCAACT TTCTTAATCT GATGCCCNCN GGTTAAAANC CCATTCTTTN 
    GANCCTNGNA AACAAACTGN NCCNATGAAG GAAAACNTTT TTTTTTTTTT 
    TTNAAAANGG GGNTAGGGTT TTAAGGGGNT TTTTGCNNAA AAAAAAACCC 
    CGGGAAACCC NTTTNTTNNN NNNTTTTTNG NCCCCCNAAA AAANNTTTTT 
    TTTTTTTNTN CGGGGAAANA AAAACCCNGN GGGGGGGNNT TTNNAAAAAA 
    NNGGGGGGNG GGGNNTTTTN NNNNNNAANN CCCCNNNNAA AAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1061753 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6237-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACGTTTGAAA ATCACGGCTA TCGACGGGTA ATTGAGACTA AAACCCGGGT 
    TTTTCCGCAA TATTCCATTG CAGCTCACGT TCTTATGAGT GATTGCTAAA 
    ATATCTGATC TTGTGAATCC AAGAGTGCAG AGGTAAGTTA TGTAATCCAC 
    TGGTTGAATG TTGTAAACCA ATCCCGGGTT TATCGCCTTT TGCGGATTCA 
    CATGCCCTGC TCCAATCGCA AACACACCGG CTGGTTTGTT ACCATCCTTT 
    ATCGCTTTCC CTTGACGATC GTACAAATCC GCTGTTGTCA TCAATGCGGA 
    TTTGATTGCA GCTGGAGACC AGTTCGGGTA TGCAGACCGG ATAAGAGCAG 
    TGATTCCGCT AACATGTGGA CAAGACATTG AAGTTCCTGA CATTACAGTG 
    AAGTTAACTC TTCTTGAATC ATAAGGAAGT CCGGTTGGTC CTANATTTTG 
    AGGCCAAGCC GCAATGATAT TGACTCCCGG AGCAATCATA TCCGGTTTTA 
    GTATCNAAGG ATTGGCTAAA CTCGGNCCTN NAGCTGAAAA CTGANCCACC 
    TNCGGNGCTN NNGACCTNCC ANTCNCCGNN CCNCCNNNAA TNNTNCNNNC 
    CTTTGGNNNN NNCGNGGNNT NNNNNTNNNC CNNNNNANGA CNG

AT1G04110.1

Model type
Protein coding
Short Description
Subtilase family protein
Curator Summary
Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.
Computational Description
STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink).
Link
InterPro Scan - TAIR