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Mutant Lines
11-6242-1

11-6242-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 5488359 [Map]; Strand: w
- AT1G15970.1 - [+] show detail - DNA glycosylase superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G15980.1 - [+] show detail - NDH-dependent cyclic electron flow 1
  Distance: -939; Region: promoter

CNTAACANAT GGCNTATGGC GAATCAAANA AGGGCAGGTA TTNTNAAAAC 
NATATGCTNG ANACANAGAA ATGGGATATG GAANTACCAG CCCGGCCAGC 
GACANCNCCN GTGGTATACT CTGCAGCTTG TNNCCGGTAG GACCAAGAAC 
TGATCGGAAC TCTCGCTCAT CGGAATTTAC GGACCGGAAT CTAGGAGGAA 
CCGACATNGA CCCGATTCTC ACAAAAAACT GCTTTTTGAT TTCACAGATC 
NATCACTGGA TCACACAACA ACAACAAAAN NGCGTATTTN CAACAGNCTC 
GAANCTTATT TCAAGAGATT ATATATCGGA AGGCCTAGAC TNTACAGCTG 
NGNNAGCNNC AGANGAGAGA CNTGGTGGGC ACCAGNNAAT ATCNCGTNGT 
NNGGAATCNT ANNAAGAGAC TANGNGGGAN NGGNNNGCGT GANNAGCGGG 
AGAGNGNGNG GGGGGGGGAN GGGGNNGNGG NAGGNNGGGA NAAAGNGAGN 
GNNNGANGGA GGGAGNNAGN GGGGGNGGGN GAGGGGGGGN NNGNGNANNC 
GNGGGCNAGC GNNGGCGGGA GGNGNNGNGG NNGGNNGGGN NGAGNGGGGG 
GGNGNAANGA ANNNNNNNAA GANNGGNGGG NGCNAGNGGG TNCGNGGGGN 
GGAGNGAGGG CGCNNGGGGN GGNANGAGNA NGGANAGGAA NANANNNGAN 
NAACGANNNA GNGAGANNGN ANGGGNGNAG AGNAAAAAGN G

AT1G15970.1

Model type: Protein coding
Short Description: DNA glycosylase superfamily protein
Computational Description: DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3684 Blast hits to 3684 proteins in 1581 species: Archae - 10; Bacteria - 3170; Metazoa - 10; Fungi - 2; Plants - 164; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G15980.1

Model type: Protein coding
Short Description: NDH-dependent cyclic electron flow 1
Curator Summary: encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.
Computational Description: NDH-dependent cyclic electron flow 1 (NDF1); INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 119 Blast hits to 119 proteins in 57 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR