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11-6247-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 536317 [Map]; Strand: w
      • AT1G02540.1 - [+] show detail - unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae ...
        Distance: -618; Region: promoter
      • AT1G02550.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -166; Region: promoter
    Flanking Genome Sequence: 11-6247-1 - 5-prime edge 
    GNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAG TAACAACATT AACTGGCAAC AAAACCATCC ATGAACTACT 
    TCGGTGTAAA ATAAAAACTG AAAATTTTAG ATAACAAATG TTACTCTAAA 
    ATTAGTGTTT ATAAACAAAA CAATTTCTCT AAAATCTTCA TTCTTAATAA 
    CCCTCTCTTT AAGCT

AT1G02540.1

Model type
Protein coding
Computational Description
unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae - 18; Bacteria - 202; Metazoa - 802; Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes - 1751 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02550.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47340.1); Has 183 Blast hits to 176 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR