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11-6294-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1678990 [Map]; Strand: c
      • AT1G05615.1 - [+] show detail - Domain of unknown function (DUF313)
        Distance: -720; Region: promoter
      • AT1G05620.1 - [+] show detail - uridine-ribohydrolase 2
        Distance: -168; Region: promoter
      • AT1G05620.2 - [+] show detail - uridine-ribohydrolase 2
        Distance: -590; Region: promoter
    Flanking Genome Sequence: 11-6294-1 - 3-prime edge 
    CTGTTGCCAA AGCATCATCA TCTCTAATGT AGTAGATCCG TCGAGAGTAA 
    GAACTCTGAC TAGAAAAATA TGGAAAGAGT TAATGGAAAA CGTGACTGAA 
    TAAAATTCGA TTTGTTTATA CAATAAAGAA ACAGACAAAC AGAGGATAAC 
    AAACCCACNG TTTGTAGACT TGGAAAAGAG ACACCTTTTA TTTTTTTTAT 
    GAACTCTTTG GTGCTAGATC ATAATTGTAT TCCAAAAGTT TTTTCTGTTG 
    TGTGTAAAAA GCCCGGATTT AGAGAGAGAT TTAGTTTTTT TTTTTTTCCG 
    GNCCTNGGGN CCNTNAAANN NNCCCCCNTT NNCCCGGNNN AAATTNCNGG 
    GGNAANGGNA NCCCCNAAAA AANTTTTNNN NANNCCGGNC CNGGNANNGG 
    GANNNNCCTN NNCCCNTTTN TTNGGNNTCN ANTGGGNNNC NNGGTTTNTT 
    NCNGGNNTNG NCCNANNTTT TNNAANTTTT NNGGNTTTAA AAAANTTGGG 
    GGTTTCNNGG GNTNNNCCCC CNTAGGGGAA NCCCCGGGNT TTNCNGGATT 
    TNGGGTNNNN AAAACCTNGG GNAATTNAAA ANTNGNGNTT TTTTTTNNNC 
    CNNNGNCNTT NNNTNAAAAA NCCNNNNNGG NNTTTTTNNC CNGGG

AT1G05615.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF313)
Computational Description
Domain of unknown function (DUF313) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT2G24670.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05620.1

Model type
Protein coding
Short Description
uridine-ribohydrolase 2
Computational Description
uridine-ribohydrolase 2 (URH2); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 6369 Blast hits to 6297 proteins in 1349 species: Archae - 75; Bacteria - 4652; Metazoa - 179; Fungi - 246; Plants - 186; Viruses - 0; Other Eukaryotes - 1031 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05620.2

Model type
Protein coding
Short Description
uridine-ribohydrolase 2
Computational Description
uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR