1. Home
  2. Mutant Lines
  3. 11-6299-1

11-6299-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26299362 [Map]; Strand: w
      • AT1G69850.1 - [+] show detail - nitrate transporter 1:2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-6299-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CACGTATGTG TCGTGTTAGG ATCAAAACAA 
    AGCATTGCTT ATAGATACGG ATACGGTACC GTATCAAAGT CACGCTCCTC 
    TTTGCTTTTG TCCTTTTTAT CAGCATCCTA ATGCACGCAT GGTTCGTTGG 
    ATTTTTTTTT GCTACAACCA TATTTTCATG TGTGATAATT TTCTTTTATG 
    CTAATAATTG TATAGATATA CATGTGGGAT CTATTTTAAT GTGAACGGAT 
    TTATGATTGN GGNGGCTTAC NCCNTGAAAC NAAAGCCACC GGGGNTACTT 
    AAACTTAAGC GATNGANAAA AAAAACTAAG NNATCTANGG GTAACAAAGN 
    TNNGAAATTT TTTAAANGGG ANNTNAATNG NGGNCCCTGG NANNNNAAAA 
    ATTTTAAAAA NANNAAANGN NAAAAANGAG GGNTTTTNNA AANGNTTAAA 
    AAGGGNTNCC AAAACNNNNN GGGGNCCNNN ANNNGAAAAN TTNAAANGGG 
    GAAAAAAACC NNNNGAGGGA AANCCCCNGG GGGNGNNGGG AAAAAANNNN 
    NNCCCCNNAA AANNGGNAAN NNNNNNNCCN NNNTNNNGNG NAAANA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26299363 [Map]; Strand: w
      • AT1G69850.1 - [+] show detail - nitrate transporter 1:2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-6299-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCGTTCA 
    ACGTGATAAC ATCTATAAAA AATCCGTATG TTAAGGTCGG GACCCAAACG 
    TATTTTTATC AGTTTTAACT GTCACTGTCT CAGGGTTAAA AAAGGAAATT 
    TAAAAACTCT TTCTTGGGTT TCAGTAACAC AACAAGCT

AT1G69850.1

Model type
Protein coding
Short Description
nitrate transporter 1:2
Curator Summary
Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.
Computational Description
nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink).
Link
InterPro Scan - TAIR