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11-6379-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 991548 [Map]; Strand: c
      • AT1G03900.1 - [+] show detail - non-intrinsic ABC protein 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6379-1 - 3-prime edge 
    GACGTAGAGA GAACTCTGTA GAGCCGTCTC TCGATTCGTC TAGGTATTTC 
    GTTCTCAGGA TCGATGACGG GAGAGGGAAG TATGCGTTTA TCGGGCTAGG 
    ATTCGCCTGA GAGGAACGAA GCGTTTGATT TCAATGTTGC NGTTATCNGG 
    ATCATGAAAA GTACNGTTAG GAGGGAGAAA GAGAAGGAGA CAGGGGAAAC 
    GAGTGAGAGC GATAATCATA TTGATATCCA TCCTGCCGTT AATCACAGAT 
    TGAAGGTAAA CCTGATCTGT TCATAAGCTA GCTTTTGGAA TTAAGATAGG 
    ATCAATGCGG AATCTGATAA TTTGGAGAAA TCTGATTGAA GCT

AT1G03900.1

Model type
Protein coding
Short Description
non-intrinsic ABC protein 4
Curator Summary
member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.
Computational Description
non-intrinsic ABC protein 4 (NAP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: extracellular transport; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: Adaptin ear-binding coat-associated protein 1 NECAP-1 (TAIR:AT3G58600.1); Has 448 Blast hits to 448 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 61; Plants - 115; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR