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11-6396-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1226285 [Map]; Strand: w
      • AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
        Distance: -290; Region: promoter
      • AT1G04510.2 - [+] show detail - MOS4-associated complex 3A
        Distance: -290; Region: promoter
    Flanking Genome Sequence: 11-6396-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAC 
    AAAAATTAGT CATAGCCGAA AAGTAGTATT CTCATAAAAA GCATATTTAG 
    TATTCTCATT TCTCAACAAT TAACATAGCC GAAAAAAGAA CCTTATATGA 
    ACAAATCATT GGTCATACTA TATTTTCATT TTTTATTAAA AAAAATTAGA 
    CTTCCGATTT ATATAATATT GTCTGAGAGT TTGGTATTAT AATATATTTG 
    TGATAGCTCT GCAAAACTTA AATCATCTCG TTTGGAAAAT GCGTGTGTGT 
    AACACTGCAC TCAAAGGCCA AAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1226302 [Map]; Strand: w
      • AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
        Distance: -273; Region: promoter
      • AT1G04510.2 - [+] show detail - MOS4-associated complex 3A
        Distance: -273; Region: promoter
    Flanking Genome Sequence: 11-6396-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CATTCTATCG TACGTGCAAA TAGAATGGCC 
    CGTACATCGT TGTCCTACCT TATACTTTAA AAGAATTTGT AATCAGAAAA 
    AATAAAAGAA AAGAATGACA AAAAAAAGGG TAAGAATTAT ACCTTTCGAG 
    TTTCTTTTCT CAGACAGAAA GAATGAACGA ACATACATAG TTTAACTAAT 
    GGGCTTCAGA AAAAAGCCTA ATTAGTTATA AATCAAGGTC TCGTTAAAAG 
    GCCCATTTGT TTAACAAGAA ATCTCTAACT TCTTGTCCTA AGCT

AT1G04510.1

Model type
Protein coding
Short Description
MOS4-associated complex 3A
Curator Summary
Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description
MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 53700 Blast hits to 26315 proteins in 787 species: Archae - 70; Bacteria - 7824; Metazoa - 20612; Fungi - 11571; Plants - 6404; Viruses - 0; Other Eukaryotes - 7219 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04510.2

Model type
Protein coding
Short Description
MOS4-associated complex 3A
Curator Summary
Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description
MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR