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11-6431-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3565834 [Map]; Strand: w
      • AT1G10730.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6431-1 - 5-prime edge 
    ATGATAATGG CGTGACCTAC ATGTTTGTAC AGCATAGTAA CATTTACCTC 
    ATGATAGCGT CCAGACAGAA CTGTAATGCT GCCAGTCTTC TCTTCTTCTT 
    GCATCGTGTA GTCGATGTAA GCATCCCTAG TGATTCAGTT TTTTGCATTT 
    CCATCTGTTT TCTGAATTTG AAGAAAAAAG AACGGCACTG TTTCATATGT 
    TACAGTCTTA TACTGATCGT AGGTCTTCAA GCATTACTTC GAGGAGTTAG 
    AGGAAGAATC TTTGAGAGAT AACTTTGTGG TAGTGGTAAG TTAATGCTTC 
    TCACATCTCT TCTTATAACT GTTTTCCCTC TTGCATGAGG TGGATATGTG 
    TGGGCGAAAG TTATTTCTAA AAACATTTAC TTATGTTACT GGCAGTATGA 
    GTTACTTGAC GAGATGATGG ACTTTGGTTA CCCTCAGTTT ACTGAGGCAA 
    GAATCCTTAG TGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3565770 [Map]; Strand: w
      • AT1G10730.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6431-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    GAATTATCAT AAGCAACCGG ATCATTTGAC TGTGAATCAC CCTGAACATA 
    TTAGACGAAA GTAAGCAAAC CCGCAGAGAA AACACTAGTC ATTTAGTCAT 
    AAGTATAACA GATTCTGATC AAATTGAATC CTTTTAAGCA CTGATCAAGC 
    T

AT1G10730.1

Model type
Protein coding
Short Description
Clathrin adaptor complexes medium subunit family protein
Computational Description
Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 2200 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 504; Plants - 215; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink).
Link
InterPro Scan - TAIR