1. Home
  2. Mutant Lines
  3. 11-6437-1

11-6437-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6779553 [Map]; Strand: c
      • AT1G19600.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6437-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC ACCGAACAAT TGGCCTTGTT CATCGTCTCC ATAAGCACCA 
    ATAATCCCAG TGGCTACACC GAACCCAACA CTCAAGCCTC GAACTGTATT 
    GGTCACACTT CCTCCAGCCA TCTTCTTTAA TGGAGCCACA CTGATATGTG 
    CATCAAGCTC TTTTAGCATG TGCTCTAACT CATCCTTTTG CACCTAGAAT 
    CACAAAAGAT CCGCCAAGTA CAATAACAAT TCAAATCCAG ATTCCGATAC 
    CAAAGGAAGA TTCAAACTTT TGCTTAAACC CACATCAAAA AACGAGATAA 
    TTCACTGAAA ACACTCAAAT AACGCTAAAA ACAGAGAAGA ATGGCTTACG 
    GCAATGGAGC CACCGCGATC ACCGGGAATT TGATCGAGTA AAGACCAATC 
    AACAGGAGCG ACGTTATCGA TAAGAGCTGC GGGTTGGAGT CCAAGTACGA 
    GTGGAGCTTC AGGGCATTTG GGCAAGGCCT CAGCTACCAT TCTCTGTTTC 
    TCAGTGTGTA ATCTATCTGN GTTGGGTAAT CTCTATAAGG CCTTGCCCGA 
    TTGTTCTNAT NAAGCTACCA NNCNGGGCCG NNNACCANGC GNGCNNNTNN 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6779626 [Map]; Strand: c
      • AT1G19600.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6437-1 - 3-prime edge 
    GGTTTTAGTG GTGTGAGTAT CTCAAGGCTC AGGAAGAAGA AAGGTTCCAC 
    TGCTCAGGTC TGTTTTGTCA AACTGTTAAA TTTTGCTTCT TCCTTATTGG 
    GAAGAGTTGG TTTTGATTGG TGTTGTTTCT TTTAGTGTGT TTGCNTTGGT 
    TGATGACTCT GGTAATCGAA CAATGCGACC ATGTCTCTCG AGTGCTGTGA 
    AGATTCAGGT TTGTGTTTCT AATTTTTTTG GGATATATAG TTATATTGAA 
    TTGGTTTGTC AGTGAGAAAG GATGGTAAAA ACTATTTCTC TTTCAGGCAG 
    ATGAATTAAG CAAAGAAGAT TTCACAGGCT CTAAGGTTGG AAGCCTAGCT 
    CCTTTAATCT CTCTTTGCCA TTAGGAAGCA TTGTAAAATC AATGGAGATT 
    TGTTCTGACA ACTTTGTTGA TGGTCTTTTT CTCTGCTGCA GTGGTTGGTT 
    CTTANATATG CTGTTCTTAA TTTACAAGTA ATTCAAGCAG CCATTCGATT 
    TGCCAAGCAA GAAGGTCTTT CTGTTTCCTT GGATTTAGCT AGTTTTGAGG 
    TATATCTTTG ATTGGAAAAA CGAAACTCTT GTTTCAGTTC CTCCTTTTAA 
    AATATGATCT GNGGCTTTAC AAATGATCAA GCATTTGTGA CTAGATGGTC 
    AGGAATT

AT1G19600.1

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink).
Link
InterPro Scan - TAIR