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11-6441-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17371705 [Map]; Strand: w
      • AT2G41660.1 - [+] show detail - Protein of unknown function, DUF617
        Distance: 2516; Region: intergenic
      • AT2G41670.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -2378; Region: intergenic
    Flanking Genome Sequence: 11-6441-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGCATATG 
    TATACATTGT TTCTGATTTG TAGTGATCTT CACGTGTATA GCTGCGGAGC 
    GTTAATACTA GAAATAATAA AAACAAAGTT TTATATTAAT TTTTTTGAGT 
    GTTAATTCTT AACAGTAGAT TTGTCATTTG TTTTTCTTTT TCTTATATGT 
    AAAACTATTG TATACTNGTA TATCCAATAG TTGTATAGTG ATCTGACATT 
    AAAAGAGGAT TCCACTATGG GCGCTTAGCT CAATTGGCGA TGATAAATCA 
    TAATTTTCGT TGTGAGAATA TATAATAAAA GTTCGTAGTC AAATAAATGA 
    ACCTCAATTA GCCTTACTAT CCTAAAACTT CCTTTTTGGG GTTTAACGTT 
    ATTATATCAT AAACCTTATA TATCTACCTT CGAATTTAAA ATGCTAAGAT 
    GCTTTTTCTA TATATAAAGA TTGTCTCATA TGGTGCTTCA CGAGTCAATT 
    TCCAACCAAC CATATAACAT ACATGATATA GGTGATCGTT CAATCGTAGT 
    GGTAACATGC GCCTTTGGTC ACATAGATCA ATCATCACTC TCAACACCCN 
    ATTNNGNTCN AATAANGANN NNCNATATNT NAAATNNCTT ATANGNCATA 
    TNNNNCNTAT GTNNANANAC NTCNANNNNA ANNAANNGAA AAGNCNNNNN 
    ANTTANNAAN CNGGGCCNGN NACCCCNCCC NGCCCCC

AT2G41660.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF617
Curator Summary
Essential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation.
Computational Description
mizu-kussei 1 (MIZ1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41670.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
Link
InterPro Scan - TAIR