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11-6490-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 569297 [Map]; Strand: w
      • AT1G02650.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-6490-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTAATCTGCC 
    ACAGAGAAGG GAAGATCCGA ATCAGTTACG GTCGGGTCAA CACAAACTCG 
    GGTCATAATT AAAAAGAATG AAATACCTCC ATTGCCCTTG TACTTGAGAA 
    TTATTACTTA ACCCTGCCAT GACCTTCTTC TTCAAGTAGG AATAAGAGAA 
    ACACTTGAAC GACGAGTCAT GACTCGGTGA GCCACTCGGA AGAAGAAGCA 
    TGAGAGAGGA AAGCTCCGAT GAAGCGGCGA AGACACTGCT GACATCTTCG 
    TTATCGATTC TAAATTTCTA AGACTGGGAA TGTAATTGTG AAGCAAAACG 
    GCCACGTCTT TGAAACGACG AAGGTAGAGA AGCGATCTGG CTTTGAGTTC 
    CAGAGCGAGT TCGTGGTGAG GAGAGATAGA AAGCGTTGAA TT

AT1G02650.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT4G02100.1); Has 193 Blast hits to 189 proteins in 47 species: Archae - 0; Bacteria - 2; Metazoa - 37; Fungi - 13; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR