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11-6495-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16645741 [Map]; Strand: c
      • AT2G39870.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 364; Region: intergenic
      • AT2G39880.1 - [+] show detail - myb domain protein 25
        Distance: 2204; Region: intergenic
    Flanking Genome Sequence: 11-6495-1 - 3-prime edge 
    ATGGGCAATG CACAGACTTT GAAATACGGA ACAACTTTTT TTCTTTCTTT 
    CAATTCTGAT ATATTATTAT CAGTGTACTG TATTTGGTTG GATATGTAGA 
    TTGTGTATGT CCCTATAATT TACTACATGA ATT

AT2G39870.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39880.1

Model type
Protein coding
Short Description
myb domain protein 25
Curator Summary
Encodes a putative transcription factor (MYB25).
Computational Description
myb domain protein 25 (MYB25); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8881 Blast hits to 7992 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 531; Plants - 5628; Viruses - 6; Other Eukaryotes - 1882 (source: NCBI BLink).
Link
InterPro Scan - TAIR