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11-6515-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 534591 [Map]; Strand: w
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: 0; Region: exon10 (3UTR)
    Flanking Genome Sequence: 11-6515-1 - 5-prime edge 
    TTCACATGAC TGCTTCTAAT TGATAATGAT ATAATGTTTT GTTTACGATA 
    GCAAAAATAT ATTTATGTTG TTGTATGCAA GTTTATGTAG CCTGTCACTA 
    TTTATTTTCT TTCCCTTTCT CTCTAAATTT ATAGTTATAA AATGAATGTC 
    TTTATTAGAC TTTTCTCTCT AAACCATCGT CTCCACTACC AAATACAGAG 
    ATAATATGTA CAAACACACT CAAACAACAA AAAATAACTC AACATTGCTT 
    TCTTCTTTTT ATCATCTGCT CTTGCCCTGC ACCATACCAA GATAAATCTT 
    TATTGACTCC ATTAATGACA GGTGGTTCTT GCATTTCGTG CCCATGGGTA 
    TTAAACACGA GCCCAAAAGG ATTGTTGTTG GTCACCATGT TGTCCCATGG 
    AGACATCTCT TGACCTCCTG CGAAATAAGA GTCTTGAAAG TGGAGGTTCC 
    TCTGCGTCTT CAATCCTGCG AAACATATCT CAGTAAACGT TTTCAGCTTC 
    CTCTCTTCTT CTTCTTGTTT AACCAGATCA AAGATCATAT CTTGGTCAAC 
    ACGTTCATCT TCCATGATTA CAACAAGCGG GTTCCCTGAA TCTTGACTTT 
    GAACCGGAAG AGGAATCTGT GAATCTTGTT GNTGAATGCC CCTATCATNA 
    TNATNATNTN GTTCTNCTTC TTCATNCANN ANGNTTTNNN AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 534475 [Map]; Strand: w
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 11-6515-1 - 3-prime edge 
    CATGTGAAGC TGAACAAGGG AAGCATAAAC CCCACCGTCT ATTTTGATCA 
    ACGTTTCGTG AGTCCCATTC TCAGCGATCA CACCGTTCTT AACGATGGCA 
    ATGACGTCAG CGTTTTTAAT GGTCGATAAC CGGTGAGCCA CCACAACCGT 
    GGTTCGGTTT ACAATCACTC GGTCAAGCGC ATCCTGAACC ACTCGCTCTG 
    ATTCTGCATC AAGAGCACTC GTTGCTTCGT CCAAAAGCAA TATCTTCGGC 
    TCTTTCACGA TGGCACGTGC TATAGCTACC CGCTGTTTCT GTCCTCCTGA 
    TAACTGAATC CCTCTCTCTC CCACCACTGT GTAGTAACCC TACAAAATTG 
    TATTGCTTGC ATCGTAAGAA ACTTTGAAAA ACAAAGTTCT TACAAATTTG 
    TTCTGTTTTT ATTCCATTAC CTGTTGTATG CTAGAGATGA ATTTGTGTGC 
    ATTGGAAAGT TCTGCAGCGG CTATGATTTC AGACTCGGTT GCGGCCTCTT 
    CACTTCCTTT GCCATAAGCA ATGTTGGCTC GAATCGTGTC GTTGAACAAG 
    ACANGTTCTT GTCCCACTAG TCCCATTTGT TGTCTCAACC ATTTCAATTG 
    CAGCTTCTTG AGCTCAACTC CGTCTAAAAT TATCTGACCG GAATCTGGAT 
    CGTAAAATCT TTGTACAGCG AGATCACCGT CGATTTCCCT GACCCACTTT 
    CGCCGA

AT1G02530.1

Model type
Protein coding
Short Description
P-glycoprotein 12
Computational Description
P-glycoprotein 12 (PGP12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 834511 Blast hits to 387558 proteins in 4042 species: Archae - 14726; Bacteria - 649276; Metazoa - 18491; Fungi - 13092; Plants - 9791; Viruses - 35; Other Eukaryotes - 129100 (source: NCBI BLink).
Link
InterPro Scan - TAIR