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11-6531-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 499089 [Map]; Strand: w
      • AT4G01170.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -408; Region: promoter
    Flanking Genome Sequence: 11-6531-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGTA GCCACTCTCA AGTCTTATCT CACGTCTCTT 
    CATATTCTCC TTTTATCTCC AAAATTTCCT TAATGGTGTA GCAAAACTTG 
    ATATCTGCAT TTAAACCCTA ATATATATTA TTACCTTCTT TCCTTTTCCG 
    TTTCTTATTT CTCTCTCTTT CTTGAGAACA ACATTCTCCT TTTCTCTCCA 
    AAATTTCCTT AATTTTCTGA GTTTTGTGTT CACAAGCAGA GTCGCTCTAA 
    ACGGTATGCT TAATTCTACG TTTCTTCATC TGTTTTGGCT TTCTTTGTTT 
    TGTCTTTATA TAGCTTTCAT GGTTTCTTTC TGCATTATGG TTTTAACGAC 
    AAGGATTAGG GTTTTTCCTT GCATAATTAT TTCCTAATTT TTGTTCTGTT 
    TTATTCGATT TAATAGAGTG TTGATTGCGA TGAAGAAGAA AGCCATTGTG 
    ATTGATGATG GATATATTCC AATTATCTGT CTTGACGAAG ATGATGATGA 
    TGATGATCTT ATGATTGATA AGGACTACAA CGTCTTTTTG GATCATCTTC 
    NAAGAGGAAG TGTAAGCCCT CNTCTTGAAG TTGACAATGG AGAATCTGAC 
    NTTCNTNGAT TAAAGATCTT TTCTTGNGAN TCGNAAGANA TNAAANNTNN 
    NNNNNNGGNG NGNNNNNNNN NCCNNCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 412771 [Map]; Strand: w
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6531-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCTACAGA CTCGAGAGCT ATCGACGTGT ACAACAAACG GCACGAGCTA 
    TTCGTCAATT CCTTCATACT GAGAAATTCT GAACTTTTTG AACTCGTATC 
    TGACGGAAAA CAGCTTATAT TTCCCGTGGA TTCACAGCTT TTCAGCTGTT 
    TATCAAGGAA TCTTTGGTTT ATGGAGCAGC CATTGGTTGG ATTCACACAA 
    TTCTCCATTA AGAAACTGTT CTCCGCTTTG TGATGCCCCC ATGGTTGGCT 
    TCAGGATTAG GGATAAACAA GAACAAAACT TATCTGTTTC TGGATGGGGG 
    AAACTTCCAA GACATTCAGA GTCTGTCCAC AAGGCTTGGT GTTAACCATG 
    GGTCTTTACC GGTTCGTTAT CTGGGGGTTC CTCTTTCCTC TTGTAAGATG 
    AAAAAGCAGG ACTTCCAGCC GCTTATTGAT AGAATTACAG CCAGATTCTG 
    TGGTTGGACA GTCAAGCATC TCTCCTTTGC TGGAAGACTT CAACTAATAC 
    AATCTGTTAT CTATTCAACT ATTACGTTTT GGGCTTCTAT TTTCATCCTT 
    CCTAACAGCT GCCTTGAAGA AATTGAGAGA ATGTGTAGTG CGTTTCTTTG 
    GAAGGGTACT ACCACGTCTG CTANAGGGGC TAAAGTCAGC TGGGTTTCTG 
    TTTGCACACC TAAGGAGTGN GGNGGNCTGG GTCTAAAGAN GTTANTTCAT 
    T

AT4G00955.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01170.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 211 Blast hits to 211 proteins in 60 species: Archae - 0; Bacteria - 22; Metazoa - 50; Fungi - 11; Plants - 77; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR