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Mutant Lines
11-6556-1

11-6556-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 318243 [Map]; Strand: w
- AT5G01820.1 - [+] show detail - serine/threonine protein kinase 1
  Distance: -3243; Region: intergenic
- AT5G01830.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -2452; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA AATGTGGTAT GGTGAGAACG ATCTCTTCCG 
AGTTCCGACA ACATTTTCTC TAAATGGGTT TCTTTATTTG TTTTAATAGT 
AGGAGATTAG TTGATCAAGG ACCACACATC CAAGGTCCAA AAAGGAGAGC 
CCGCATCAAT TAAAGTATCC CATGGGGACA CAGGGAACAT GCATGGTTAG 
GTTTCTGCAT ATTCTCCGAT CCATTCCTTG CTTTCGCTAT TTACTTATTT 
CTCAACATTT ATTGTTACAA TTATTAATTA TTCATTTATT TGTATCTTTT 
AATGTGTGCC AAGTAAATTG ATTTTGTGTC CAGGTTCAAG TGCAAGAAAT 
ACTAGTATAA AACTAAATAA TGCTTATATC ATATGTTTGG TCTGACGATA 
CCTTGATGGT GAAATCTCTT CGATATCTGG TTCTTATTAT GAACCATTTT 
CATATATATT AAATAAAAAT CAATACATAT ATACACGTTG AAGTAATTTT 
TATATGGACT TAAAGAATTG TGTCGAGTAT GTGGAGTGAG TCAGCATAAG 
TCGGGATAAT TTTGTCTGCT TCCTCGCAAA TAATTAAACG GTGATGTGCA 
TATTTAACTA ACTAAATGTA TGTTTTTTTA TCATATAGTT NATGGGCATN 
GCGTAATATA CAAATCANAT GACAACGCTG AAGGAGGCAC TCATTGATCG 
NGAGATTG

3 prime edge [+] show sequence

Chromosome: 5; Position: 318216 [Map]; Strand: w
- AT5G01820.1 - [+] show detail - serine/threonine protein kinase 1
  Distance: -3216; Region: intergenic
- AT5G01830.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -2479; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAA 
GAATTGATTT TATGACTGAG GCGCAAAGAA TTGAAAAATC TATGGCCGGA 
GTCCATTTCT TTCTTTATTC GTATATTTGC TATCCAAATT TAATAGGAGT 
AGGTGGTTAA TATTTACGAA TTGTAGAAAA TTGACTTAGC CTAACCATAA 
AATTTAAACC GTCGATGTCA TCAGAATTTA ATTTGTTTTA ATCTTTATTT 
AGGTTTCTGC TTACCTAATC AGCTGCGTAT AACTTTGAAA CAGTTTTCTC 
GCGTTATTTA AACAAAATTT TGGCTACTGA CTGACGTTTC CCTTAGTTCT 
TATTCTAGTC TGCGTATGCG ATATTATGAA ATACTAATAA ATTTGTCGGT 
AAGCAATTGT AATAACATTA AACTAGTCGT GAGAATATGA ATCATATATA 
CAAAAAACTA CTTCCTGCAA TACAAGCGAG AACATTTTCA GATTTTTCTA 
TACTCACTAA TGATAATAAT ATATGTATAG ACATAAGACG CGTGTCTATT 
AAGATCGAGA AAAAAAGAAT GTTGTGTGTT TTGACCGTTA AGTGTTTGTA 
ATTAATCTTC ATGATGAAAC GAATGTAAAT CTATGTATAC CANAAATACA 
GNTTAACAAA AGAATTACCA NNCCGGGCCG NNNACCNCNC GTG

AT5G01820.1

Model type: Protein coding
Short Description: serine/threonine protein kinase 1
Curator Summary: Encodes a CBL-interacting serine/threonine protein kinase.
Computational Description: serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G01830.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR