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11-6571-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29344533 [Map]; Strand: w
      • AT1G78030.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unkno...
        Distance: 709; Region: intergenic
      • AT1G78040.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
        Distance: -1305; Region: intergenic
    Flanking Genome Sequence: 11-6571-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGA 
    TGGAGATATT TAATCTCTGC TTACTCCCAA ACACATTTTG GTTACACCTC 
    AAACTCTATC GTTGCTTCTG ATTCCAGTAG CTGATGGTCT ACTACAACGT 
    TTTTGGTTTT TGTGTGTTTG ATGATTATAA GAGAAGAAGC AAAACAGGAA 
    TAGACTTTTT GGTGATTACT AATTAATGCA GTGCAAGGGA GACAAGAGTC 
    TACTTGGTGG TTATGTCTCT TGTTAGAGAG CCGGTCTTGT TTAGAGATTT 
    TGGTTCTGTT GTTCTGTGTT TGTGTACTCA CACAAGTCTG CTGTTTGGAT 
    AACCCGAGAC AGAGTAAAAA CTAAGAAGAC AACAAATATA GATGATGATC 
    CTGAATCAAT CCTCAAAAGC AAACTGTTAG AATATATTAT GGAGATGATG 
    TTGCAAAACC AGTTTATGTA GCACAAGCAG GAGTTTCTAA AAATTTCAAC 
    TTCCGACATC GTTGGTCGTT CTCCCGGTGC TGCTTGTGTG GATAGCANAG 
    ATACTTGTAT CATCATTTCA ACTTCTTCCT TTACATAATC CTNNTNAAGC 
    TACCNNCCNG GGCCGNNNNN CNNNCNT

AT1G78030.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT4G37900.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G78040.1

Model type
Protein coding
Short Description
Pollen Ole e 1 allergen and extensin family protein
Computational Description
Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), TonB box, conserved site (InterPro:IPR010916); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G08685.1); Has 286 Blast hits to 286 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 286; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR