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Mutant Lines
11-6573-1

11-6573-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 23402103 [Map]; Strand: w
- AT3G63360.1 - [+] show detail - defensin-related
  Distance: -512; Region: promoter
- AT3G63370.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATGTCA TGAGACTACT GAGTAACATG ATGTACTCTG 
CTTCGGCGAT TTCGTTTCCA AGGGTTCGTC TGCATTGTAG TATTCCGACA 
GAGCTATCCT GCCGGAGAAA CCCATTCCGA CAGAGCAATC AGCCCGTCCA 
AGTCCCTTCT CCGAAGCTCG CTTGTTTCGA CGGAGTCCTA ACTGAAGATT 
TTCAACGGCT GGACGTCAGC GAAAACAACT CTCCAGTCGA AGCCTTTGCC 
TACGTTCTCG AGCTTTGTGG TAAACGTAGA GCTGTCTCAC AAGGTCGGCA 
GCTGCATTCG CGCATTTTCA AGACTTTCCC CTCTTTCGAA TTAGATTTTT 
TGGCCGGCAA GCT

3 prime edge [+] show sequence

Chromosome: 3; Position: 21538847 [Map]; Strand: c
- AT3G58160.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: intron15 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
CAATTGGTGC AGCTACAATT GCAACAGCTG ATGGAGACAT TGAACTCTAC 
GGAACCCCAC TACATCAGAT GTGTTAAGCC AAACAATTTG TTGCAACCAA 
CAGTGTTTGA CAATGCCAAT GTCTTGCATC AGTTACGCTC TGGGGTCTGT 
TTTCTTCTGA ATAATTCATA CCAACATCTT TGATGTCTTG AGGTGTTATA 
TGATATTTGT CTTATGCAGG GTGTTCTTGA GGCCATCAGA GTGAAATGCG 
CTGGATATCC AACAAATAGA ACTTTCATTG AATTTTTAAA TCGATTTCTC 
ATTCTTGCAC CGGAAATTCT GAAAGGAGAG TATGTATCAG TTCTCCCCGT 
TAAGCT

AT3G58160.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator Summary: Class XI myosin gene expressed in flowers from 4-6 week old plants and leaves from 3 week old plants
Computational Description: XIJ; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex, vacuole; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 12832 Blast hits to 9780 proteins in 894 species: Archae - 19; Bacteria - 223; Metazoa - 7630; Fungi - 1066; Plants - 790; Viruses - 83; Other Eukaryotes - 3021 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63360.1

Model type: Protein coding
Short Description: defensin-related
Curator Summary: Encodes a defensin-like (DEFL) family protein.
Computational Description: defensin-related; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Knottin (InterPro:IPR003614); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63370.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary: Encodes a chloroplast RNA editing factor.
Computational Description: ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 62; Plants - 47536; Viruses - 0; Other Eukaryotes - 502 (source: NCBI BLink).
Link: InterPro Scan - TAIR