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11-6749-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1028675 [Map]; Strand: w
      • AT1G04000.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6749-1 - 5-prime edge 
    CTCTCCGAAG AGTGTGCCTT GGGTGAGGAA CTCGTGGCTC AGATAACCGG 
    CTAACATCAG TTGGTTCGAG CCGATCGGCT CGGCTGCTGC GGTTGAAGAT 
    TTCTTGGAAA TGGGATTAAC CGGCGGAGGA ACAAGTTTCG GCNGGCGGAG 
    AGGGAAACTT GGCGATTTCC GGCGGATTAT CGGTGACGGA GGAGATGAAG 
    GCGTCTCGTT CTTTGCGCTT ATCCGCCGTT AGAACGCGAC GTGGGGGAAG 
    ACGCATCGTT TTGGTGTTCA TGGTGATACT CTATTGGATG CATGCCACGT 
    CAGCACCCAA TAATAAAATT GAAATATTGA CTGTCGTAAA ACAGTCAAAT 
    CAAAATAATC GGGTGAAAAA GAGAAAATCA AAATTTATAA AGATTTTGTT 
    TTCTTTTTTA ATTGCGACCG AATAACTTAN AGGGAGAGTC TGTTTTAAAA 
    AAAAACTTAA AGAGGGAGAG ATTNCGAGAG AGAGAGAATA ACANAAAGAG 
    GGGATNNCNN AAAGTTTANG GGAATGGGTG GGTTACNACA NTTTATANAG 
    GCTGGAGGTT TANATTACCC TCTNCTTTTN NNTAAAANNA CATTAATGCC 
    NCTCNNTTNN AATTNACNGG ATTGNCCTTC TTTGGTTNAC CCNNTNTTNN 
    NTNNNNGGNT NCCCCNNNNA NNNNAANNNN TGACTAANNN NNCNTTTTTT 
    TTNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1028559 [Map]; Strand: w
      • AT1G04000.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6749-1 - 3-prime edge 
    TCGGAGAGCA ATGGAACCCG GCTCGAGCCC AAGCCGAGTC CAGTAAGATA 
    AAGCCGAGCC ATACTATTGA GCCGGCTGAG GAAAGTGAGC CGAAACGGAA 
    GAGGTATAGG GAGGTTGCTA ATCTTCTCCG GTCAGATGGG GCCCAACTGC 
    CCGGCATCGT CAATCCTGCC CAGCTTGCCC GATTTCTCAA ACTGTGATCG 
    GCGTAATCCG GTGTCCACGT GGAGATAGAT CATTGGTCTG TCGTCCGGCA 
    AGCGAGACAG CCTTAAAACC GAAACCTTCT TCTCTCTCTT TTTTTTTCAA 
    ATGTTTTTTT ANAATCCTNT NTGTAAAGCT GACTCGCTCG CTCTCTCTTC 
    TCATCATCGT CTTCCTCGGA AATCGACTGA AAAAATTTAG GGTTTGTTGT 
    TGAGGTANAT GCTCCTCTTT TGTACATCAN AAATATCAAT TAGCCAATGG 
    ATTATGTTTT CANATCAGCA AAATTGAACC CTTTTCTCTG TGTGTATGGA 
    TTTTGATGAT TCCAAAGTGA TTAGAGATCT ATACAAAACG ATATAAAAAG 
    TTATCAATTT CAATATCTTC TCTAATTATC GAACTTCGTC GATGGATCTA 
    AGATTCAAAT GCTAATTGAG ATTCAACCTC CGGCCAGTTT GGTGTAATCT 
    GANATCATCA TTTTTCTGGA ANACAAATTT TGGTGATGCC TTGGTATANC 
    CGAANTT

AT1G04000.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR